Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PTP4A1P2-201ENST00000546033 454 ntBASIC14.55□□□□□ -0.08
PDGFAP04085 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.55□□□□□ -0.08
PDGFAP04085 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.55□□□□□ -0.08
PDGFAP04085 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
PDGFAP04085 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
PDGFAP04085 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PDGFAP04085 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.55□□□□□ -0.08
PDGFAP04085 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.55□□□□□ -0.08
PDGFAP04085 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.55□□□□□ -0.08
PDGFAP04085 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
PDGFAP04085 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PDGFAP04085 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.55□□□□□ -0.08
PDGFAP04085 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PDGFAP04085 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.55□□□□□ -0.08
PDGFAP04085 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFAP04085 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.54□□□□□ -0.08
PDGFAP04085 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.54□□□□□ -0.08
PDGFAP04085 INTS4P2-202ENST00000614726 2019 ntBASIC14.54□□□□□ -0.08
PDGFAP04085 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
PDGFAP04085 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.54□□□□□ -0.08
PDGFAP04085 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
PDGFAP04085 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.54□□□□□ -0.08
PDGFAP04085 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.54□□□□□ -0.08
PDGFAP04085 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.54□□□□□ -0.08
PDGFAP04085 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.54□□□□□ -0.08
PDGFAP04085 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.54□□□□□ -0.08
PDGFAP04085 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.54□□□□□ -0.08
PDGFAP04085 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.54□□□□□ -0.08
PDGFAP04085 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.54□□□□□ -0.08
PDGFAP04085 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.54□□□□□ -0.08
PDGFAP04085 CLUHP6-201ENST00000580789 941 ntBASIC14.54□□□□□ -0.08
PDGFAP04085 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.54□□□□□ -0.08
PDGFAP04085 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.54□□□□□ -0.08
PDGFAP04085 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.54□□□□□ -0.08
PDGFAP04085 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.54□□□□□ -0.08
PDGFAP04085 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.54□□□□□ -0.08
PDGFAP04085 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.54□□□□□ -0.08
PDGFAP04085 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.54□□□□□ -0.08
PDGFAP04085 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
PDGFAP04085 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PDGFAP04085 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PDGFAP04085 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFAP04085 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PDGFAP04085 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
PDGFAP04085 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.53□□□□□ -0.08
PDGFAP04085 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PDGFAP04085 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.53□□□□□ -0.08
PDGFAP04085 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFAP04085 RNF216P1-203ENST00000404404 2427 ntBASIC14.53□□□□□ -0.08
PDGFAP04085 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PDGFAP04085 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFAP04085 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFAP04085 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.53□□□□□ -0.08
PDGFAP04085 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.53□□□□□ -0.08
PDGFAP04085 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFAP04085 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.53□□□□□ -0.08
PDGFAP04085 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFAP04085 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFAP04085 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PDGFAP04085 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFAP04085 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.53□□□□□ -0.08
PDGFAP04085 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFAP04085 AC134915.1-201ENST00000426461 574 ntBASIC14.53□□□□□ -0.08
PDGFAP04085 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.53□□□□□ -0.08
PDGFAP04085 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFAP04085 ZNF767P-206ENST00000513792 565 ntBASIC14.53□□□□□ -0.08
PDGFAP04085 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.53□□□□□ -0.08
PDGFAP04085 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.53□□□□□ -0.08
PDGFAP04085 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.53□□□□□ -0.08
PDGFAP04085 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.53□□□□□ -0.08
PDGFAP04085 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.53□□□□□ -0.08
PDGFAP04085 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms