Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.25■□□□□ 0.19
LMNAP02545 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMNAP02545 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.25■□□□□ 0.19
LMNAP02545 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMNAP02545 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMNAP02545 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LMNAP02545 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.25■□□□□ 0.19
LMNAP02545 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LMNAP02545 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.25■□□□□ 0.19
LMNAP02545 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.25■□□□□ 0.19
LMNAP02545 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.25■□□□□ 0.19
LMNAP02545 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMNAP02545 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.25■□□□□ 0.19
LMNAP02545 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.25■□□□□ 0.19
LMNAP02545 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.25■□□□□ 0.19
LMNAP02545 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.25■□□□□ 0.19
LMNAP02545 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LMNAP02545 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.25■□□□□ 0.19
LMNAP02545 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.25■□□□□ 0.19
LMNAP02545 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMNAP02545 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
LMNAP02545 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.25■□□□□ 0.19
LMNAP02545 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMNAP02545 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMNAP02545 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LMNAP02545 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LMNAP02545 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.25■□□□□ 0.19
LMNAP02545 KRT8P12-202ENST00000472924 1397 ntBASIC16.25■□□□□ 0.19
LMNAP02545 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LMNAP02545 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
LMNAP02545 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LMNAP02545 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.24■□□□□ 0.19
LMNAP02545 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.24■□□□□ 0.19
LMNAP02545 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.24■□□□□ 0.19
LMNAP02545 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.24■□□□□ 0.19
LMNAP02545 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.24■□□□□ 0.19
LMNAP02545 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.24■□□□□ 0.19
LMNAP02545 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LMNAP02545 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.24■□□□□ 0.19
LMNAP02545 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.24■□□□□ 0.19
LMNAP02545 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.24■□□□□ 0.19
LMNAP02545 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.24■□□□□ 0.19
LMNAP02545 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.24■□□□□ 0.19
LMNAP02545 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
LMNAP02545 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.24■□□□□ 0.19
LMNAP02545 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.24■□□□□ 0.19
LMNAP02545 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.24■□□□□ 0.19
LMNAP02545 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.24■□□□□ 0.19
LMNAP02545 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.24■□□□□ 0.19
LMNAP02545 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.24■□□□□ 0.19
LMNAP02545 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
LMNAP02545 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LMNAP02545 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.24■□□□□ 0.19
LMNAP02545 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
LMNAP02545 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
LMNAP02545 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.23■□□□□ 0.19
LMNAP02545 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.23■□□□□ 0.19
LMNAP02545 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LMNAP02545 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LMNAP02545 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LMNAP02545 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LMNAP02545 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LMNAP02545 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LMNAP02545 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.23■□□□□ 0.19
LMNAP02545 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LMNAP02545 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LMNAP02545 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.23■□□□□ 0.19
LMNAP02545 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LMNAP02545 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LMNAP02545 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LMNAP02545 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LMNAP02545 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.23■□□□□ 0.19
LMNAP02545 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LMNAP02545 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.23■□□□□ 0.19
LMNAP02545 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.23■□□□□ 0.19
LMNAP02545 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms