Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.35■□□□□ 0.37
ALDH1A1P00352 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC17.35■□□□□ 0.37
ALDH1A1P00352 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALDH1A1P00352 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.35■□□□□ 0.37
ALDH1A1P00352 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALDH1A1P00352 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALDH1A1P00352 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALDH1A1P00352 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
ALDH1A1P00352 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALDH1A1P00352 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC17.35■□□□□ 0.37
ALDH1A1P00352 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ALDH1A1P00352 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17.35■□□□□ 0.37
ALDH1A1P00352 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC17.35■□□□□ 0.37
ALDH1A1P00352 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.35■□□□□ 0.37
ALDH1A1P00352 AC018463.1-201ENST00000456674 917 ntBASIC17.35■□□□□ 0.37
ALDH1A1P00352 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.35■□□□□ 0.37
ALDH1A1P00352 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.35■□□□□ 0.37
ALDH1A1P00352 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ALDH1A1P00352 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC17.35■□□□□ 0.37
ALDH1A1P00352 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC17.35■□□□□ 0.37
ALDH1A1P00352 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.35■□□□□ 0.37
ALDH1A1P00352 AC007881.3-201ENST00000608897 607 ntBASIC17.35■□□□□ 0.37
ALDH1A1P00352 MIR6769A-201ENST00000617340 73 ntBASIC17.35■□□□□ 0.37
ALDH1A1P00352 AC007718.1-201ENST00000621078 280 ntBASIC17.35■□□□□ 0.37
ALDH1A1P00352 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ALDH1A1P00352 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALDH1A1P00352 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.35■□□□□ 0.37
ALDH1A1P00352 CAP2P1-201ENST00000557743 1390 ntBASIC17.35■□□□□ 0.37
ALDH1A1P00352 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALDH1A1P00352 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALDH1A1P00352 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALDH1A1P00352 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ALDH1A1P00352 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.35■□□□□ 0.37
ALDH1A1P00352 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
ALDH1A1P00352 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.35■□□□□ 0.37
ALDH1A1P00352 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ALDH1A1P00352 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.34■□□□□ 0.37
ALDH1A1P00352 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.34■□□□□ 0.37
ALDH1A1P00352 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
ALDH1A1P00352 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.34■□□□□ 0.37
ALDH1A1P00352 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ALDH1A1P00352 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.34■□□□□ 0.37
ALDH1A1P00352 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ALDH1A1P00352 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC17.34■□□□□ 0.37
ALDH1A1P00352 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.34■□□□□ 0.37
ALDH1A1P00352 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC17.34■□□□□ 0.37
ALDH1A1P00352 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.34■□□□□ 0.37
ALDH1A1P00352 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.34■□□□□ 0.37
ALDH1A1P00352 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.34■□□□□ 0.37
ALDH1A1P00352 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 MIR6858-201ENST00000620733 67 ntBASIC17.34■□□□□ 0.37
ALDH1A1P00352 AC092299.1-201ENST00000632679 757 ntBASIC17.34■□□□□ 0.37
ALDH1A1P00352 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ALDH1A1P00352 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
ALDH1A1P00352 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.33■□□□□ 0.37
ALDH1A1P00352 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.33■□□□□ 0.37
ALDH1A1P00352 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ALDH1A1P00352 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ALDH1A1P00352 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ALDH1A1P00352 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ALDH1A1P00352 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.33■□□□□ 0.37
ALDH1A1P00352 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ALDH1A1P00352 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A1P00352 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A1P00352 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
ALDH1A1P00352 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A1P00352 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A1P00352 AL512430.1-201ENST00000392575 860 ntBASIC17.33■□□□□ 0.36
ALDH1A1P00352 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ALDH1A1P00352 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC17.33■□□□□ 0.36
ALDH1A1P00352 AL139008.1-201ENST00000437894 228 ntBASIC17.33■□□□□ 0.36
ALDH1A1P00352 CHCHD2P9-201ENST00000461726 456 ntBASIC17.33■□□□□ 0.36
ALDH1A1P00352 AC010234.1-201ENST00000494599 870 ntBASIC17.33■□□□□ 0.36
ALDH1A1P00352 NSD1-211ENST00000511258 809 ntTSL 3 BASIC17.33■□□□□ 0.36
ALDH1A1P00352 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
ALDH1A1P00352 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
ALDH1A1P00352 MIR3677-201ENST00000578964 60 ntBASIC17.33■□□□□ 0.36
ALDH1A1P00352 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ALDH1A1P00352 RNF146-211ENST00000609447 607 ntTSL 4 BASIC17.33■□□□□ 0.36
ALDH1A1P00352 AC087392.5-201ENST00000612517 489 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms