Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TOMM40O96008 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TOMM40O96008 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
TOMM40O96008 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TOMM40O96008 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TOMM40O96008 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TOMM40O96008 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TOMM40O96008 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TOMM40O96008 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.19□□□□□ -0.46
TOMM40O96008 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
TOMM40O96008 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.19□□□□□ -0.46
TOMM40O96008 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TOMM40O96008 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TOMM40O96008 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TOMM40O96008 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TOMM40O96008 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
TOMM40O96008 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TOMM40O96008 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TOMM40O96008 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
TOMM40O96008 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
TOMM40O96008 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TOMM40O96008 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TOMM40O96008 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
TOMM40O96008 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.18□□□□□ -0.46
TOMM40O96008 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.18□□□□□ -0.46
TOMM40O96008 MROH4P-201ENST00000431302 1578 ntBASIC12.18□□□□□ -0.46
TOMM40O96008 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
TOMM40O96008 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.18□□□□□ -0.46
TOMM40O96008 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TOMM40O96008 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.18□□□□□ -0.46
TOMM40O96008 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
TOMM40O96008 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.18□□□□□ -0.46
TOMM40O96008 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.18□□□□□ -0.46
TOMM40O96008 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TOMM40O96008 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.18□□□□□ -0.46
TOMM40O96008 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
TOMM40O96008 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.18□□□□□ -0.46
TOMM40O96008 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.18□□□□□ -0.46
TOMM40O96008 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
TOMM40O96008 SPDYE17-201ENST00000412399 783 ntBASIC12.18□□□□□ -0.46
TOMM40O96008 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.18□□□□□ -0.46
TOMM40O96008 DNAJB3-201ENST00000446806 729 ntBASIC12.18□□□□□ -0.46
TOMM40O96008 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.18□□□□□ -0.46
TOMM40O96008 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.18□□□□□ -0.46
TOMM40O96008 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.18□□□□□ -0.46
TOMM40O96008 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.18□□□□□ -0.46
TOMM40O96008 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.18□□□□□ -0.46
TOMM40O96008 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.18□□□□□ -0.46
TOMM40O96008 AC005829.1-201ENST00000570002 483 ntBASIC12.18□□□□□ -0.46
TOMM40O96008 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
TOMM40O96008 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.18□□□□□ -0.46
TOMM40O96008 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.18□□□□□ -0.46
TOMM40O96008 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.18□□□□□ -0.46
TOMM40O96008 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
TOMM40O96008 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.18□□□□□ -0.46
TOMM40O96008 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.18□□□□□ -0.46
TOMM40O96008 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.18□□□□□ -0.46
TOMM40O96008 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
TOMM40O96008 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.18□□□□□ -0.46
TOMM40O96008 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.18□□□□□ -0.46
TOMM40O96008 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TOMM40O96008 AL356585.2-201ENST00000625078 2396 ntBASIC12.18□□□□□ -0.46
TOMM40O96008 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.18□□□□□ -0.46
TOMM40O96008 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
TOMM40O96008 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TOMM40O96008 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TOMM40O96008 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms