Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.01□□□□□ -0.33
SIX6O95475 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.01□□□□□ -0.33
SIX6O95475 AC006011.2-201ENST00000621313 1158 ntBASIC13.01□□□□□ -0.33
SIX6O95475 AC016734.2-201ENST00000624325 1377 ntBASIC13.01□□□□□ -0.33
SIX6O95475 AC006504.4-201ENST00000592118 1568 ntBASIC13.01□□□□□ -0.33
SIX6O95475 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
SIX6O95475 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.01□□□□□ -0.33
SIX6O95475 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.01□□□□□ -0.33
SIX6O95475 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 AC130686.1-201ENST00000622936 2466 ntBASIC13.01□□□□□ -0.33
SIX6O95475 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SIX6O95475 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.01□□□□□ -0.33
SIX6O95475 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SIX6O95475 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SIX6O95475 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SIX6O95475 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13□□□□□ -0.33
SIX6O95475 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
SIX6O95475 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SIX6O95475 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SIX6O95475 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13□□□□□ -0.33
SIX6O95475 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13□□□□□ -0.33
SIX6O95475 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SIX6O95475 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13□□□□□ -0.33
SIX6O95475 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SIX6O95475 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13□□□□□ -0.33
SIX6O95475 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 AC073508.3-201ENST00000619697 1419 ntBASIC13□□□□□ -0.33
SIX6O95475 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13□□□□□ -0.33
SIX6O95475 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 AC087499.1-201ENST00000418141 1075 ntBASIC13□□□□□ -0.33
SIX6O95475 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13□□□□□ -0.33
SIX6O95475 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13□□□□□ -0.33
SIX6O95475 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
SIX6O95475 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13□□□□□ -0.33
SIX6O95475 AC074051.2-201ENST00000565115 352 ntBASIC13□□□□□ -0.33
SIX6O95475 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13□□□□□ -0.33
SIX6O95475 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 AL031055.1-201ENST00000606362 631 ntBASIC13□□□□□ -0.33
SIX6O95475 AL121672.3-201ENST00000608644 468 ntBASIC13□□□□□ -0.33
SIX6O95475 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13□□□□□ -0.33
SIX6O95475 AC097493.4-201ENST00000641197 219 ntBASIC13□□□□□ -0.33
SIX6O95475 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13□□□□□ -0.33
SIX6O95475 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13□□□□□ -0.33
SIX6O95475 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13□□□□□ -0.33
SIX6O95475 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SIX6O95475 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13□□□□□ -0.33
SIX6O95475 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13□□□□□ -0.33
SIX6O95475 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13□□□□□ -0.33
SIX6O95475 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13□□□□□ -0.33
SIX6O95475 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
SIX6O95475 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SIX6O95475 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.99□□□□□ -0.33
SIX6O95475 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SIX6O95475 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.99□□□□□ -0.33
SIX6O95475 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.99□□□□□ -0.33
SIX6O95475 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.99□□□□□ -0.33
SIX6O95475 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SIX6O95475 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SIX6O95475 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms