Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL13O43927 AC126755.1-201ENST00000525846 6405 ntBASIC13.84□□□□□ -0.19
CXCL13O43927 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CXCL13O43927 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CXCL13O43927 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CXCL13O43927 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CXCL13O43927 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CXCL13O43927 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CXCL13O43927 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.83□□□□□ -0.19
CXCL13O43927 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CXCL13O43927 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.83□□□□□ -0.19
CXCL13O43927 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.83□□□□□ -0.19
CXCL13O43927 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CXCL13O43927 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.83□□□□□ -0.2
CXCL13O43927 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CXCL13O43927 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCL13O43927 AC007389.4-201ENST00000454674 793 ntBASIC13.83□□□□□ -0.2
CXCL13O43927 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.83□□□□□ -0.2
CXCL13O43927 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.83□□□□□ -0.2
CXCL13O43927 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCL13O43927 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.83□□□□□ -0.2
CXCL13O43927 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCL13O43927 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CXCL13O43927 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.83□□□□□ -0.2
CXCL13O43927 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCL13O43927 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.83□□□□□ -0.2
CXCL13O43927 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCL13O43927 AC239800.4-201ENST00000603712 296 ntBASIC13.83□□□□□ -0.2
CXCL13O43927 TMBIM7P-203ENST00000641617 1718 ntBASIC13.83□□□□□ -0.2
CXCL13O43927 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CXCL13O43927 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCL13O43927 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CXCL13O43927 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCL13O43927 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCL13O43927 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL13O43927 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.83□□□□□ -0.2
CXCL13O43927 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL13O43927 CICP11-201ENST00000434745 2827 ntBASIC13.82□□□□□ -0.2
CXCL13O43927 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL13O43927 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL13O43927 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.82□□□□□ -0.2
CXCL13O43927 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL13O43927 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL13O43927 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL13O43927 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.82□□□□□ -0.2
CXCL13O43927 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CXCL13O43927 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL13O43927 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL13O43927 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL13O43927 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL13O43927 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL13O43927 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL13O43927 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.82□□□□□ -0.2
CXCL13O43927 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL13O43927 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.82□□□□□ -0.2
CXCL13O43927 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CXCL13O43927 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL13O43927 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.82□□□□□ -0.2
CXCL13O43927 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.82□□□□□ -0.2
CXCL13O43927 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.82□□□□□ -0.2
CXCL13O43927 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.82□□□□□ -0.2
CXCL13O43927 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL13O43927 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.82□□□□□ -0.2
CXCL13O43927 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.82□□□□□ -0.2
CXCL13O43927 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.82□□□□□ -0.2
CXCL13O43927 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.82□□□□□ -0.2
CXCL13O43927 AC005252.2-201ENST00000624630 1141 ntBASIC13.82□□□□□ -0.2
CXCL13O43927 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL13O43927 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL13O43927 MIR600HG-201ENST00000449175 5984 ntBASIC13.82□□□□□ -0.2
CXCL13O43927 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
CXCL13O43927 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CXCL13O43927 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL13O43927 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL13O43927 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL13O43927 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL13O43927 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CXCL13O43927 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CXCL13O43927 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms