Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC28A2O43868 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC28A2O43868 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC28A2O43868 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC28A2O43868 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SLC28A2O43868 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC28A2O43868 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC28A2O43868 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC28A2O43868 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC28A2O43868 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC28A2O43868 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC28A2O43868 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC28A2O43868 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SLC28A2O43868 TUBB1P2-201ENST00000422712 1306 ntBASIC14.98□□□□□ -0.01
SLC28A2O43868 TUBB1P1-201ENST00000503144 1300 ntBASIC14.98□□□□□ -0.01
SLC28A2O43868 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC28A2O43868 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC28A2O43868 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC28A2O43868 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC28A2O43868 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC28A2O43868 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC28A2O43868 AC020658.6-201ENST00000623564 1870 ntBASIC14.98□□□□□ -0.01
SLC28A2O43868 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC28A2O43868 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
SLC28A2O43868 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SLC28A2O43868 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC28A2O43868 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC28A2O43868 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC28A2O43868 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SLC28A2O43868 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.98□□□□□ -0.01
SLC28A2O43868 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.98□□□□□ -0.01
SLC28A2O43868 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.98□□□□□ -0.01
SLC28A2O43868 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.98□□□□□ -0.01
SLC28A2O43868 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC28A2O43868 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC28A2O43868 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC28A2O43868 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.98□□□□□ -0.01
SLC28A2O43868 AL079307.3-201ENST00000556114 283 ntBASIC14.98□□□□□ -0.01
SLC28A2O43868 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.98□□□□□ -0.01
SLC28A2O43868 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC28A2O43868 AC243960.2-201ENST00000600996 747 ntBASIC14.98□□□□□ -0.01
SLC28A2O43868 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.98□□□□□ -0.01
SLC28A2O43868 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC28A2O43868 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SLC28A2O43868 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC28A2O43868 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.98□□□□□ -0.01
SLC28A2O43868 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC28A2O43868 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC28A2O43868 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC28A2O43868 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC28A2O43868 AC136621.1-201ENST00000624017 2304 ntBASIC14.98□□□□□ -0.01
SLC28A2O43868 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SLC28A2O43868 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC28A2O43868 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC28A2O43868 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SLC28A2O43868 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC28A2O43868 SSR4P1-203ENST00000599569 2260 ntBASIC14.97□□□□□ -0.01
SLC28A2O43868 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SLC28A2O43868 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 MYO15B-237ENST00000642007 4893 ntBASIC14.97□□□□□ -0.01
SLC28A2O43868 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC28A2O43868 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC28A2O43868 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC28A2O43868 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SLC28A2O43868 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
SLC28A2O43868 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.97□□□□□ -0.01
SLC28A2O43868 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SLC28A2O43868 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC28A2O43868 AL080243.2-201ENST00000418783 582 ntBASIC14.97□□□□□ -0.01
SLC28A2O43868 CTBP2P5-201ENST00000454986 1264 ntBASIC14.97□□□□□ -0.01
SLC28A2O43868 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SLC28A2O43868 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC28A2O43868 AC044860.1-202ENST00000559481 777 ntBASIC14.97□□□□□ -0.01
SLC28A2O43868 AC105021.1-202ENST00000570572 669 ntBASIC14.97□□□□□ -0.01
SLC28A2O43868 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.97□□□□□ -0.01
SLC28A2O43868 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
SLC28A2O43868 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.97□□□□□ -0.01
SLC28A2O43868 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC28A2O43868 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC28A2O43868 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SLC28A2O43868 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC28A2O43868 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms