Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CHD1O14646 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC24.09■■□□□ 1.45
CHD1O14646 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CHD1O14646 DUT-207ENST00000559416 635 ntTSL 2 BASIC24.09■■□□□ 1.45
CHD1O14646 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC24.09■■□□□ 1.45
CHD1O14646 TMBIM7P-202ENST00000641474 1516 ntBASIC24.09■■□□□ 1.45
CHD1O14646 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHD1O14646 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC24.09■■□□□ 1.45
CHD1O14646 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
CHD1O14646 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
CHD1O14646 AHCYP4-201ENST00000419201 1315 ntBASIC24.08■■□□□ 1.45
CHD1O14646 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CHD1O14646 FAS-202ENST00000352159 1722 ntTSL 5 BASIC24.08■■□□□ 1.45
CHD1O14646 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHD1O14646 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
CHD1O14646 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHD1O14646 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC24.08■■□□□ 1.45
CHD1O14646 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
CHD1O14646 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHD1O14646 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC24.08■■□□□ 1.45
CHD1O14646 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CHD1O14646 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC24.08■■□□□ 1.45
CHD1O14646 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CHD1O14646 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC24.08■■□□□ 1.44
CHD1O14646 ZBED1P1-201ENST00000502364 1930 ntBASIC24.08■■□□□ 1.44
CHD1O14646 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
CHD1O14646 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CHD1O14646 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
CHD1O14646 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
CHD1O14646 AC127383.1-201ENST00000444697 1800 ntBASIC24.07■■□□□ 1.44
CHD1O14646 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC24.07■■□□□ 1.44
CHD1O14646 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CHD1O14646 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC24.07■■□□□ 1.44
CHD1O14646 TLE1P1-201ENST00000422965 589 ntBASIC24.07■■□□□ 1.44
CHD1O14646 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CHD1O14646 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC24.07■■□□□ 1.44
CHD1O14646 HNRNPA1P42-201ENST00000458678 957 ntBASIC24.07■■□□□ 1.44
CHD1O14646 RHEB-207ENST00000496004 744 ntTSL 2 BASIC24.07■■□□□ 1.44
CHD1O14646 RN7SL665P-201ENST00000578793 300 ntBASIC24.07■■□□□ 1.44
CHD1O14646 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC24.07■■□□□ 1.44
CHD1O14646 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC24.07■■□□□ 1.44
CHD1O14646 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
CHD1O14646 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD1O14646 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD1O14646 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CHD1O14646 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC24.07■■□□□ 1.44
CHD1O14646 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD1O14646 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD1O14646 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC24.07■■□□□ 1.44
CHD1O14646 API5-208ENST00000531273 1868 ntTSL 2 BASIC24.07■■□□□ 1.44
CHD1O14646 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CHD1O14646 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD1O14646 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC24.07■■□□□ 1.44
CHD1O14646 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CHD1O14646 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD1O14646 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD1O14646 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
CHD1O14646 SNX15-201ENST00000352068 771 ntTSL 5 BASIC24.07■■□□□ 1.44
CHD1O14646 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD1O14646 MIR645-201ENST00000385283 94 ntBASIC24.07■■□□□ 1.44
CHD1O14646 MIR1301-201ENST00000408518 82 ntBASIC24.07■■□□□ 1.44
CHD1O14646 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CHD1O14646 RPL35P9-201ENST00000446059 350 ntBASIC24.07■■□□□ 1.44
CHD1O14646 ALG1L3P-201ENST00000503331 765 ntBASIC24.07■■□□□ 1.44
CHD1O14646 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC24.07■■□□□ 1.44
CHD1O14646 CYP4F36P-201ENST00000589193 186 ntBASIC24.07■■□□□ 1.44
CHD1O14646 AC027601.3-201ENST00000622907 509 ntBASIC24.07■■□□□ 1.44
CHD1O14646 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD1O14646 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD1O14646 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
CHD1O14646 AL109809.1-201ENST00000418979 1367 ntBASIC24.06■■□□□ 1.44
CHD1O14646 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC24.06■■□□□ 1.44
CHD1O14646 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHD1O14646 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC24.06■■□□□ 1.44
CHD1O14646 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CHD1O14646 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC24.06■■□□□ 1.44
CHD1O14646 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
CHD1O14646 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHD1O14646 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
CHD1O14646 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC24.06■■□□□ 1.44
CHD1O14646 HLA-DPA2-205ENST00000433582 733 ntBASIC24.06■■□□□ 1.44
CHD1O14646 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CHD1O14646 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHD1O14646 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CHD1O14646 GCOM2-201ENST00000509133 1104 ntBASIC24.06■■□□□ 1.44
CHD1O14646 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC24.06■■□□□ 1.44
CHD1O14646 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC24.06■■□□□ 1.44
CHD1O14646 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CHD1O14646 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHD1O14646 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHD1O14646 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
CHD1O14646 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1O14646 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC24.05■■□□□ 1.44
CHD1O14646 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1O14646 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
CHD1O14646 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1O14646 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC24.05■■□□□ 1.44
CHD1O14646 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHD1O14646 PYY2-201ENST00000315776 282 ntBASIC24.05■■□□□ 1.44
CHD1O14646 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms