Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC25.72■■□□□ 1.71
CUX2O14529 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CUX2O14529 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC25.72■■□□□ 1.71
CUX2O14529 AMT-239ENST00000636865 1914 ntTSL 5 BASIC25.72■■□□□ 1.71
CUX2O14529 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CUX2O14529 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC25.72■■□□□ 1.71
CUX2O14529 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
CUX2O14529 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CUX2O14529 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CUX2O14529 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CUX2O14529 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CUX2O14529 PTGER4P2-201ENST00000328411 252 ntBASIC25.72■■□□□ 1.71
CUX2O14529 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CUX2O14529 MBP-201ENST00000354542 575 ntTSL 2 BASIC25.72■■□□□ 1.71
CUX2O14529 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
CUX2O14529 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
CUX2O14529 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CUX2O14529 PTGER4P3-201ENST00000458150 252 ntBASIC25.72■■□□□ 1.71
CUX2O14529 CDC23-208ENST00000505120 455 ntTSL 3 BASIC25.72■■□□□ 1.71
CUX2O14529 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC25.72■■□□□ 1.71
CUX2O14529 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
CUX2O14529 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC25.72■■□□□ 1.71
CUX2O14529 AP005264.6-204ENST00000588436 719 ntBASIC25.72■■□□□ 1.71
CUX2O14529 NAV1-210ENST00000593583 726 ntBASIC25.72■■□□□ 1.71
CUX2O14529 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC25.72■■□□□ 1.71
CUX2O14529 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC25.72■■□□□ 1.71
CUX2O14529 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
CUX2O14529 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CUX2O14529 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CUX2O14529 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CUX2O14529 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
CUX2O14529 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC25.71■■□□□ 1.71
CUX2O14529 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CUX2O14529 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CUX2O14529 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CUX2O14529 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CUX2O14529 STK26-204ENST00000481105 1835 ntTSL 2 BASIC25.71■■□□□ 1.71
CUX2O14529 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CUX2O14529 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC25.71■■□□□ 1.71
CUX2O14529 HLA-DMA-203ENST00000395305 777 ntBASIC25.71■■□□□ 1.71
CUX2O14529 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC25.71■■□□□ 1.71
CUX2O14529 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CUX2O14529 AC022616.1-201ENST00000518688 554 ntBASIC25.71■■□□□ 1.71
CUX2O14529 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC25.71■■□□□ 1.71
CUX2O14529 AL590235.1-201ENST00000564650 861 ntBASIC25.71■■□□□ 1.71
CUX2O14529 AC110057.1-201ENST00000636031 898 ntBASIC25.71■■□□□ 1.71
CUX2O14529 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC25.71■■□□□ 1.71
CUX2O14529 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CUX2O14529 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC25.7■■□□□ 1.71
CUX2O14529 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
CUX2O14529 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CUX2O14529 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC25.7■■□□□ 1.7
CUX2O14529 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CUX2O14529 CCL25-202ENST00000315626 450 ntTSL 2 BASIC25.7■■□□□ 1.7
CUX2O14529 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CUX2O14529 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.7
CUX2O14529 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC25.7■■□□□ 1.7
CUX2O14529 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CUX2O14529 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC25.7■■□□□ 1.7
CUX2O14529 MT3-203ENST00000565838 421 ntTSL 3 BASIC25.7■■□□□ 1.7
CUX2O14529 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC25.7■■□□□ 1.7
CUX2O14529 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC25.7■■□□□ 1.7
CUX2O14529 PSME2-217ENST00000615264 874 ntTSL 5 BASIC25.7■■□□□ 1.7
CUX2O14529 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.7
CUX2O14529 PSME2-218ENST00000630027 185 ntTSL 3 BASIC25.7■■□□□ 1.7
CUX2O14529 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
CUX2O14529 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC25.7■■□□□ 1.7
CUX2O14529 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
CUX2O14529 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CUX2O14529 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
CUX2O14529 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CUX2O14529 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CUX2O14529 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CUX2O14529 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
CUX2O14529 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CUX2O14529 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CUX2O14529 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC25.69■■□□□ 1.7
CUX2O14529 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CUX2O14529 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CUX2O14529 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CUX2O14529 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC25.69■■□□□ 1.7
CUX2O14529 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CUX2O14529 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
CUX2O14529 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
CUX2O14529 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
CUX2O14529 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC25.69■■□□□ 1.7
CUX2O14529 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CUX2O14529 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CUX2O14529 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC25.69■■□□□ 1.7
CUX2O14529 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC25.69■■□□□ 1.7
CUX2O14529 AC007326.1-201ENST00000604539 458 ntBASIC25.69■■□□□ 1.7
CUX2O14529 AC002044.2-201ENST00000624910 970 ntBASIC25.69■■□□□ 1.7
CUX2O14529 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CUX2O14529 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CUX2O14529 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CUX2O14529 AC244394.1-201ENST00000435000 1665 ntBASIC25.69■■□□□ 1.7
CUX2O14529 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CUX2O14529 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CUX2O14529 PHB-210ENST00000511832 1509 ntTSL 2 BASIC25.68■■□□□ 1.7
CUX2O14529 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms