Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 REXO1L2P-201ENST00000425429 2069 ntBASIC13.28□□□□□ -0.28
TMEM235A6NFC5 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.27□□□□□ -0.28
TMEM235A6NFC5 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.27□□□□□ -0.28
TMEM235A6NFC5 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM235A6NFC5 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM235A6NFC5 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.27□□□□□ -0.28
TMEM235A6NFC5 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM235A6NFC5 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.27□□□□□ -0.28
TMEM235A6NFC5 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM235A6NFC5 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
TMEM235A6NFC5 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
TMEM235A6NFC5 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM235A6NFC5 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TMEM235A6NFC5 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 AC027601.5-201ENST00000624065 2482 ntBASIC13.27□□□□□ -0.29
TMEM235A6NFC5 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 AC142381.1-201ENST00000426099 345 ntBASIC13.27□□□□□ -0.29
TMEM235A6NFC5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 IGHV3-22-201ENST00000520721 359 ntBASIC13.27□□□□□ -0.29
TMEM235A6NFC5 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 AC084364.1-201ENST00000551967 1556 ntBASIC13.27□□□□□ -0.29
TMEM235A6NFC5 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TMEM235A6NFC5 AC126335.2-201ENST00000623362 4637 ntBASIC13.26□□□□□ -0.29
TMEM235A6NFC5 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TMEM235A6NFC5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms