Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 AL359258.3-201ENST00000622910 2331 ntBASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 AC084364.1-201ENST00000551967 1556 ntBASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 AC074338.1-201ENST00000416825 156 ntBASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 AL512361.1-201ENST00000554200 418 ntBASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 AC074044.1-201ENST00000609673 707 ntBASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 AC139530.3-201ENST00000620344 690 ntBASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 AC093028.1-201ENST00000622998 982 ntBASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 AC087499.5-201ENST00000452760 1342 ntBASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 AC007191.1-201ENST00000623179 2995 ntBASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHGA11Q9Y5H2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 KC6-207ENST00000600644 2311 ntTSL 3 BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 AC010336.2-201ENST00000564226 506 ntBASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PCDHGA11Q9Y5H2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms