Protein–RNA interactions for Protein: Q9Y256

RCE1, CAAX prenyl protease 2, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCE1Q9Y256 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RCE1Q9Y256 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.06□□□□□ -0.16
RCE1Q9Y256 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RCE1Q9Y256 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.06□□□□□ -0.16
RCE1Q9Y256 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RCE1Q9Y256 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RCE1Q9Y256 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RCE1Q9Y256 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RCE1Q9Y256 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.06□□□□□ -0.16
RCE1Q9Y256 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.06□□□□□ -0.16
RCE1Q9Y256 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RCE1Q9Y256 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 OR2I1P-209ENST00000641730 5365 ntBASIC14.05□□□□□ -0.16
RCE1Q9Y256 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 AL844908.2-201ENST00000609461 460 ntBASIC14.05□□□□□ -0.16
RCE1Q9Y256 AL390754.1-201ENST00000619088 582 ntBASIC14.05□□□□□ -0.16
RCE1Q9Y256 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 SBF1P1-201ENST00000444527 5631 ntBASIC14.05□□□□□ -0.16
RCE1Q9Y256 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
RCE1Q9Y256 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RCE1Q9Y256 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.04□□□□□ -0.16
RCE1Q9Y256 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCE1Q9Y256 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RCE1Q9Y256 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCE1Q9Y256 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.04□□□□□ -0.16
RCE1Q9Y256 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCE1Q9Y256 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCE1Q9Y256 AC104581.4-201ENST00000623126 3052 ntBASIC14.04□□□□□ -0.16
RCE1Q9Y256 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.04□□□□□ -0.16
RCE1Q9Y256 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.04□□□□□ -0.16
RCE1Q9Y256 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCE1Q9Y256 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.04□□□□□ -0.16
RCE1Q9Y256 AC087481.3-201ENST00000602886 1894 ntBASIC14.04□□□□□ -0.16
RCE1Q9Y256 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCE1Q9Y256 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.04□□□□□ -0.16
RCE1Q9Y256 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RCE1Q9Y256 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RCE1Q9Y256 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCE1Q9Y256 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCE1Q9Y256 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCE1Q9Y256 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCE1Q9Y256 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCE1Q9Y256 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.04□□□□□ -0.16
RCE1Q9Y256 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.04□□□□□ -0.16
RCE1Q9Y256 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.04□□□□□ -0.16
RCE1Q9Y256 TSSK5P-201ENST00000423978 907 ntBASIC14.04□□□□□ -0.16
RCE1Q9Y256 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.04□□□□□ -0.16
RCE1Q9Y256 BASP1P1-201ENST00000430708 665 ntBASIC14.04□□□□□ -0.16
RCE1Q9Y256 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.04□□□□□ -0.16
RCE1Q9Y256 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.04□□□□□ -0.16
RCE1Q9Y256 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.04□□□□□ -0.16
RCE1Q9Y256 TARDBPP1-201ENST00000442013 1203 ntBASIC14.04□□□□□ -0.16
RCE1Q9Y256 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.04□□□□□ -0.16
RCE1Q9Y256 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RCE1Q9Y256 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RCE1Q9Y256 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.04□□□□□ -0.16
RCE1Q9Y256 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms