Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PDIA3P2-201ENST00000428073 158 ntBASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 MSRA-203ENST00000441698 788 ntTSL 2 BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 KLF2P1-201ENST00000447438 1042 ntBASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 RCC2P8-201ENST00000502779 1035 ntBASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 AC134698.3-201ENST00000523880 214 ntBASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 AC100827.2-201ENST00000563214 1194 ntBASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 CDK7-214ENST00000626796 358 ntTSL 5 BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 AL805961.1-203ENST00000641078 1258 ntBASIC22.47■■□□□ 1.19
SHANK2Q9UPX8 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 BID-213ENST00000615414 2236 ntTSL 5 BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 AC104784.1-201ENST00000473096 294 ntBASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 VPS18-202ENST00000558474 873 ntTSL 3 BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHANK2Q9UPX8 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 ISCA2P1-201ENST00000425548 448 ntBASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 AL645933.1-201ENST00000440087 609 ntBASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 IQSEC3P1-201ENST00000538799 536 ntBASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 AC084018.2-201ENST00000613093 2607 ntBASIC22.45■■□□□ 1.18
SHANK2Q9UPX8 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 AC069218.1-201ENST00000435269 762 ntBASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 AL139384.1-201ENST00000612143 3047 ntBASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 C18orf15-201ENST00000623680 2534 ntBASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SHANK2Q9UPX8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHANK2Q9UPX8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHANK2Q9UPX8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC22.43■■□□□ 1.18
SHANK2Q9UPX8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
SHANK2Q9UPX8 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SHANK2Q9UPX8 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC22.43■■□□□ 1.18
SHANK2Q9UPX8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC22.43■■□□□ 1.18
SHANK2Q9UPX8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC22.43■■□□□ 1.18
SHANK2Q9UPX8 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC22.43■■□□□ 1.18
SHANK2Q9UPX8 AC078875.1-201ENST00000431907 724 ntBASIC22.43■■□□□ 1.18
SHANK2Q9UPX8 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC22.43■■□□□ 1.18
SHANK2Q9UPX8 AL133466.1-201ENST00000447582 150 ntBASIC22.43■■□□□ 1.18
SHANK2Q9UPX8 CFL1-214ENST00000534769 758 ntTSL 2 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms