Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 FAM86LP-201ENST00000478302 853 ntBASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA1Q9UND3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 CROCCP4-201ENST00000457096 498 ntBASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 PHKG1P2-201ENST00000457537 863 ntBASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 BTNL10-201ENST00000595971 695 ntBASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 MIR6799-201ENST00000620297 69 ntBASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 REXO1L1P-202ENST00000608646 1974 ntBASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA1Q9UND3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms