Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 AC120045.2-201ENST00000567334 178 ntBASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 LINC00528-201ENST00000600723 2160 ntBASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGC3Q9UN70 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 AL645937.2-201ENST00000396808 931 ntBASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 PIN1P1-201ENST00000412108 996 ntBASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 AC134915.1-201ENST00000426461 574 ntBASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 HMGN1P19-201ENST00000436976 333 ntBASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 AC124283.3-201ENST00000570869 594 ntBASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 ACE3P-201ENST00000423435 1973 ntBASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGC3Q9UN70 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGC3Q9UN70 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms