Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 MIR769-201ENST00000390225 118 ntBASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 NKAIN1P1-201ENST00000435754 582 ntBASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 SPTLC1P5-201ENST00000450718 252 ntBASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.12■□□□□ 0.33
PDLIM7Q9NR12 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 AL133466.1-201ENST00000447582 150 ntBASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 COX5BP1-201ENST00000507622 393 ntBASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 AC044849.1-201ENST00000519737 1188 ntBASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 PRSS30P-206ENST00000641773 873 ntBASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PDLIM7Q9NR12 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 ACTBP8-201ENST00000403258 1108 ntBASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 MAGEA5-201ENST00000446757 942 ntBASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 AC007663.3-201ENST00000609632 465 ntBASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 BX539320.1-201ENST00000623759 877 ntBASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDLIM7Q9NR12 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms