Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CBX8Q9HC52 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.31■□□□□ 0.36
CBX8Q9HC52 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 SPCS2P4-201ENST00000436160 681 ntBASIC17.31■□□□□ 0.36
CBX8Q9HC52 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.31■□□□□ 0.36
CBX8Q9HC52 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.31■□□□□ 0.36
CBX8Q9HC52 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.31■□□□□ 0.36
CBX8Q9HC52 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.31■□□□□ 0.36
CBX8Q9HC52 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CBX8Q9HC52 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CBX8Q9HC52 AP3S2-216ENST00000617003 1561 ntBASIC17.31■□□□□ 0.36
CBX8Q9HC52 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.31■□□□□ 0.36
CBX8Q9HC52 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CBX8Q9HC52 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBX8Q9HC52 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX8Q9HC52 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX8Q9HC52 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX8Q9HC52 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBX8Q9HC52 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX8Q9HC52 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX8Q9HC52 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX8Q9HC52 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX8Q9HC52 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX8Q9HC52 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX8Q9HC52 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX8Q9HC52 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX8Q9HC52 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBX8Q9HC52 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBX8Q9HC52 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 HIST3H2BA-201ENST00000436555 524 ntBASIC17.3■□□□□ 0.36
CBX8Q9HC52 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 AC079781.5-202ENST00000641784 3743 ntBASIC17.3■□□□□ 0.36
CBX8Q9HC52 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX8Q9HC52 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX8Q9HC52 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 AC152010.1-201ENST00000415779 2006 ntBASIC17.3■□□□□ 0.36
CBX8Q9HC52 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CBX8Q9HC52 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 REXO1L4P-201ENST00000605109 1937 ntBASIC17.29■□□□□ 0.36
CBX8Q9HC52 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 AC092135.3-201ENST00000624151 1846 ntBASIC17.29■□□□□ 0.36
CBX8Q9HC52 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 ADH5P3-201ENST00000433842 1137 ntBASIC17.29■□□□□ 0.36
CBX8Q9HC52 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CBX8Q9HC52 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.29■□□□□ 0.36
CBX8Q9HC52 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms