Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.23■□□□□ 0.03
NPAS2Q99743 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.23■□□□□ 0.03
NPAS2Q99743 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NPAS2Q99743 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NPAS2Q99743 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.23■□□□□ 0.03
NPAS2Q99743 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NPAS2Q99743 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.23■□□□□ 0.03
NPAS2Q99743 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.23■□□□□ 0.03
NPAS2Q99743 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.23■□□□□ 0.03
NPAS2Q99743 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.23■□□□□ 0.03
NPAS2Q99743 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.23■□□□□ 0.03
NPAS2Q99743 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.23■□□□□ 0.03
NPAS2Q99743 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.23■□□□□ 0.03
NPAS2Q99743 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.23■□□□□ 0.03
NPAS2Q99743 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.23■□□□□ 0.03
NPAS2Q99743 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.23■□□□□ 0.03
NPAS2Q99743 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.23■□□□□ 0.03
NPAS2Q99743 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.23■□□□□ 0.03
NPAS2Q99743 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NPAS2Q99743 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 BNIP3P1-202ENST00000550043 1585 ntBASIC15.23■□□□□ 0.03
NPAS2Q99743 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NPAS2Q99743 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NPAS2Q99743 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NPAS2Q99743 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NPAS2Q99743 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS2Q99743 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS2Q99743 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS2Q99743 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.22■□□□□ 0.03
NPAS2Q99743 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS2Q99743 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS2Q99743 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS2Q99743 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.22■□□□□ 0.03
NPAS2Q99743 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS2Q99743 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS2Q99743 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS2Q99743 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NPAS2Q99743 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS2Q99743 REXO1L1P-202ENST00000608646 1974 ntBASIC15.22■□□□□ 0.03
NPAS2Q99743 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS2Q99743 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS2Q99743 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS2Q99743 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.22■□□□□ 0.03
NPAS2Q99743 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS2Q99743 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.22■□□□□ 0.03
NPAS2Q99743 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS2Q99743 MIR943-201ENST00000401286 94 ntBASIC15.22■□□□□ 0.03
NPAS2Q99743 SPDYE7P-202ENST00000420373 878 ntBASIC15.22■□□□□ 0.03
NPAS2Q99743 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS2Q99743 AC055876.3-201ENST00000431496 288 ntBASIC15.22■□□□□ 0.03
NPAS2Q99743 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS2Q99743 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
NPAS2Q99743 AC125807.1-201ENST00000483097 614 ntBASIC15.22■□□□□ 0.03
NPAS2Q99743 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS2Q99743 RARRES2P9-201ENST00000565168 469 ntBASIC15.22■□□□□ 0.03
NPAS2Q99743 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.22■□□□□ 0.03
NPAS2Q99743 MIR4453-201ENST00000584019 89 ntBASIC15.22■□□□□ 0.03
NPAS2Q99743 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.22■□□□□ 0.03
NPAS2Q99743 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS2Q99743 AL096865.1-201ENST00000606796 927 ntBASIC15.22■□□□□ 0.03
NPAS2Q99743 AC138649.4-201ENST00000612222 287 ntBASIC15.22■□□□□ 0.03
NPAS2Q99743 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS2Q99743 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS2Q99743 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS2Q99743 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.22■□□□□ 0.03
NPAS2Q99743 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS2Q99743 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS2Q99743 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS2Q99743 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.22■□□□□ 0.03
NPAS2Q99743 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS2Q99743 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS2Q99743 FO538757.1-201ENST00000623083 1397 ntBASIC15.22■□□□□ 0.03
NPAS2Q99743 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
NPAS2Q99743 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS2Q99743 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS2Q99743 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms