Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 LINC00552-201ENST00000625151 2579 ntBASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
FOXRED1Q96CU9 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 ELL2P1-201ENST00000413990 1906 ntBASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 AC136604.1-201ENST00000418535 575 ntBASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 AC142381.1-201ENST00000426099 345 ntBASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 ALG1L5P-201ENST00000482043 771 ntBASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 HNRNPUP1-201ENST00000554987 333 ntBASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 AC099522.2-201ENST00000607001 744 ntBASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
FOXRED1Q96CU9 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms