Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 AL590627.1-203ENST00000421194 1026 ntBASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 AC097359.3-201ENST00000603982 1210 ntBASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFWD2Q8NHY2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 AC018529.2-202ENST00000611482 3087 ntBASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 RPS8P6-201ENST00000426177 609 ntBASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 PHKG1P2-201ENST00000457537 863 ntBASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 IGHV3-22-201ENST00000520721 359 ntBASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 Z83851.2-201ENST00000609564 659 ntBASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 AC120114.3-201ENST00000611923 658 ntBASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 IL9RP2-201ENST00000423948 1312 ntBASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 AC113367.3-201ENST00000508316 1912 ntBASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFWD2Q8NHY2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 VN2R19P-201ENST00000442399 1052 ntBASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 FDX1P1-201ENST00000449115 551 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms