Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 SPDYE19P-201ENST00000338590 713 ntBASIC13.59□□□□□ -0.23
CPEB3Q8NE35 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 MIR661-201ENST00000384842 89 ntBASIC13.59□□□□□ -0.23
CPEB3Q8NE35 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 FAM207CP-201ENST00000443486 507 ntBASIC13.59□□□□□ -0.23
CPEB3Q8NE35 KRT18P43-201ENST00000469825 1281 ntBASIC13.59□□□□□ -0.23
CPEB3Q8NE35 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 AC023310.3-201ENST00000557027 670 ntBASIC13.59□□□□□ -0.23
CPEB3Q8NE35 AC100756.1-201ENST00000562736 682 ntBASIC13.59□□□□□ -0.23
CPEB3Q8NE35 AC138749.3-201ENST00000567691 622 ntBASIC13.59□□□□□ -0.23
CPEB3Q8NE35 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 AC116165.1-201ENST00000611806 668 ntBASIC13.59□□□□□ -0.23
CPEB3Q8NE35 AL158212.4-201ENST00000624062 1286 ntBASIC13.59□□□□□ -0.23
CPEB3Q8NE35 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 AC144831.1-201ENST00000573312 2656 ntBASIC13.59□□□□□ -0.23
CPEB3Q8NE35 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CPEB3Q8NE35 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CPEB3Q8NE35 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 SPTLC1P1-201ENST00000447199 261 ntBASIC13.58□□□□□ -0.24
CPEB3Q8NE35 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 SERBP1P5-201ENST00000510079 1181 ntBASIC13.58□□□□□ -0.24
CPEB3Q8NE35 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 AL391069.4-201ENST00000609583 481 ntBASIC13.58□□□□□ -0.24
CPEB3Q8NE35 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPEB3Q8NE35 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 AL109954.1-202ENST00000564051 2148 ntBASIC13.57□□□□□ -0.24
CPEB3Q8NE35 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPEB3Q8NE35 CLK3P2-201ENST00000427566 1453 ntBASIC13.57□□□□□ -0.24
CPEB3Q8NE35 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms