Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SYNE4Q8N205 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC19.07■□□□□ 0.64
SYNE4Q8N205 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC19.07■□□□□ 0.64
SYNE4Q8N205 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.07■□□□□ 0.64
SYNE4Q8N205 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19.07■□□□□ 0.64
SYNE4Q8N205 APOA2-204ENST00000464492 530 ntTSL 3 BASIC19.07■□□□□ 0.64
SYNE4Q8N205 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.07■□□□□ 0.64
SYNE4Q8N205 PPY2P-201ENST00000582808 702 ntBASIC19.07■□□□□ 0.64
SYNE4Q8N205 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.07■□□□□ 0.64
SYNE4Q8N205 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SYNE4Q8N205 MIR6727-201ENST00000620702 65 ntBASIC19.07■□□□□ 0.64
SYNE4Q8N205 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.07■□□□□ 0.64
SYNE4Q8N205 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC19.07■□□□□ 0.64
SYNE4Q8N205 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.07■□□□□ 0.64
SYNE4Q8N205 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SYNE4Q8N205 KRT8P4-201ENST00000509735 1454 ntBASIC19.07■□□□□ 0.64
SYNE4Q8N205 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SYNE4Q8N205 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.07■□□□□ 0.64
SYNE4Q8N205 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
SYNE4Q8N205 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SYNE4Q8N205 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.07■□□□□ 0.64
SYNE4Q8N205 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.07■□□□□ 0.64
SYNE4Q8N205 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SYNE4Q8N205 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.07■□□□□ 0.64
SYNE4Q8N205 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.07■□□□□ 0.64
SYNE4Q8N205 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
SYNE4Q8N205 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SYNE4Q8N205 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNE4Q8N205 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SYNE4Q8N205 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNE4Q8N205 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNE4Q8N205 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SYNE4Q8N205 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.06■□□□□ 0.64
SYNE4Q8N205 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNE4Q8N205 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SYNE4Q8N205 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.06■□□□□ 0.64
SYNE4Q8N205 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC19.06■□□□□ 0.64
SYNE4Q8N205 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SYNE4Q8N205 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNE4Q8N205 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNE4Q8N205 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SYNE4Q8N205 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SYNE4Q8N205 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SYNE4Q8N205 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SYNE4Q8N205 RGS5-214ENST00000429865 754 ntTSL 3 BASIC19.06■□□□□ 0.64
SYNE4Q8N205 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.06■□□□□ 0.64
SYNE4Q8N205 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
SYNE4Q8N205 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC19.06■□□□□ 0.64
SYNE4Q8N205 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNE4Q8N205 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SYNE4Q8N205 CHMP4BP1-201ENST00000556017 588 ntBASIC19.06■□□□□ 0.64
SYNE4Q8N205 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.06■□□□□ 0.64
SYNE4Q8N205 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SYNE4Q8N205 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNE4Q8N205 AC026691.1-201ENST00000602502 2017 ntBASIC19.06■□□□□ 0.64
SYNE4Q8N205 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNE4Q8N205 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SYNE4Q8N205 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SYNE4Q8N205 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
SYNE4Q8N205 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SYNE4Q8N205 AC055811.4-201ENST00000624039 1754 ntBASIC19.06■□□□□ 0.64
SYNE4Q8N205 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC19.06■□□□□ 0.64
SYNE4Q8N205 AC090616.6-203ENST00000579186 1945 ntBASIC19.06■□□□□ 0.64
SYNE4Q8N205 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNE4Q8N205 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SYNE4Q8N205 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
SYNE4Q8N205 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNE4Q8N205 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNE4Q8N205 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC19.05■□□□□ 0.64
SYNE4Q8N205 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNE4Q8N205 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC19.05■□□□□ 0.64
SYNE4Q8N205 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNE4Q8N205 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNE4Q8N205 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNE4Q8N205 FXNP2-201ENST00000411625 547 ntBASIC19.05■□□□□ 0.64
SYNE4Q8N205 HINT2P1-201ENST00000419438 481 ntBASIC19.05■□□□□ 0.64
SYNE4Q8N205 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.05■□□□□ 0.64
SYNE4Q8N205 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC19.05■□□□□ 0.64
SYNE4Q8N205 AC005730.2-201ENST00000564549 1184 ntBASIC19.05■□□□□ 0.64
SYNE4Q8N205 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC19.05■□□□□ 0.64
SYNE4Q8N205 MIR3619-201ENST00000579667 83 ntBASIC19.05■□□□□ 0.64
SYNE4Q8N205 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNE4Q8N205 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNE4Q8N205 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SYNE4Q8N205 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNE4Q8N205 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNE4Q8N205 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
SYNE4Q8N205 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNE4Q8N205 AL513523.2-202ENST00000427283 2040 ntBASIC19.05■□□□□ 0.64
SYNE4Q8N205 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNE4Q8N205 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNE4Q8N205 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNE4Q8N205 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNE4Q8N205 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
SYNE4Q8N205 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNE4Q8N205 CLUHP2-201ENST00000426660 1303 ntBASIC19.04■□□□□ 0.64
SYNE4Q8N205 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNE4Q8N205 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNE4Q8N205 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SYNE4Q8N205 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms