Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ELK1P1-201ENST00000485699 580 ntBASIC16.29■□□□□ 0.2
SCUBE3Q8IX30 AC140912.1-201ENST00000577171 1054 ntBASIC16.29■□□□□ 0.2
SCUBE3Q8IX30 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.29■□□□□ 0.2
SCUBE3Q8IX30 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
SCUBE3Q8IX30 TMEM261P1-201ENST00000604899 340 ntBASIC16.29■□□□□ 0.2
SCUBE3Q8IX30 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.29■□□□□ 0.2
SCUBE3Q8IX30 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.29■□□□□ 0.2
SCUBE3Q8IX30 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCUBE3Q8IX30 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.29■□□□□ 0.2
SCUBE3Q8IX30 AC023024.2-201ENST00000623561 1993 ntBASIC16.29■□□□□ 0.2
SCUBE3Q8IX30 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.29■□□□□ 0.2
SCUBE3Q8IX30 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCUBE3Q8IX30 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.29■□□□□ 0.2
SCUBE3Q8IX30 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SCUBE3Q8IX30 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SCUBE3Q8IX30 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.29■□□□□ 0.2
SCUBE3Q8IX30 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SCUBE3Q8IX30 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.29■□□□□ 0.2
SCUBE3Q8IX30 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SCUBE3Q8IX30 AC006486.2-201ENST00000624246 2199 ntBASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 AC091951.1-201ENST00000512854 2465 ntBASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 AC148477.4-201ENST00000613430 1793 ntBASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCUBE3Q8IX30 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 GAPDHP40-201ENST00000505218 1006 ntBASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 AC026410.3-201ENST00000514280 936 ntBASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 WASH4P-201ENST00000564273 1246 ntBASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 AC025048.6-201ENST00000634326 1161 ntBASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 AC126365.1-201ENST00000578585 1514 ntBASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.27■□□□□ 0.2
SCUBE3Q8IX30 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.27■□□□□ 0.19
SCUBE3Q8IX30 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SCUBE3Q8IX30 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCUBE3Q8IX30 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCUBE3Q8IX30 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCUBE3Q8IX30 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms