Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM42Q8IWZ5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM42Q8IWZ5 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM42Q8IWZ5 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM42Q8IWZ5 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM42Q8IWZ5 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM42Q8IWZ5 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM42Q8IWZ5 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM42Q8IWZ5 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 MED15P5-201ENST00000423150 992 ntBASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 HCG4B-203ENST00000450128 991 ntBASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 AC140113.2-201ENST00000604370 208 ntBASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 AC010507.1-201ENST00000633895 436 ntBASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM42Q8IWZ5 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 AC007967.2-201ENST00000432613 625 ntBASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 AL591424.1-201ENST00000442569 1213 ntBASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 AC105233.2-201ENST00000523697 349 ntBASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 AF228730.5-201ENST00000530288 346 ntBASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 AC011467.4-201ENST00000594891 528 ntBASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 FAM197Y3-203ENST00000618346 717 ntBASIC15.53■□□□□ 0.08
TRIM42Q8IWZ5 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms