Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 AC079178.1-201ENST00000420915 656 ntBASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 HNRNPUP1-201ENST00000554987 333 ntBASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 AL096828.3-201ENST00000615354 462 ntBASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 DBET-201ENST00000630918 3363 ntBASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 KRT18P43-201ENST00000469825 1281 ntBASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 SERPINA13P-202ENST00000478994 924 ntBASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 RN7SL720P-201ENST00000488178 304 ntBASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 SLED1-202ENST00000512051 380 ntBASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 EEF1DP1-201ENST00000585891 896 ntBASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RP1L1Q8IWN7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 AP001282.1-201ENST00000531301 1499 ntBASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 AC078819.1-201ENST00000547454 765 ntBASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 AC012085.1-201ENST00000548270 765 ntBASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RP1L1Q8IWN7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms