Protein–RNA interactions for Protein: Q59GN2

RPL39P5, Putative 60S ribosomal protein L39-like 5, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P5Q59GN2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
RPL39P5Q59GN2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P5Q59GN2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RPL39P5Q59GN2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P5Q59GN2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P5Q59GN2 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P5Q59GN2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.73□□□□□ -0.37
RPL39P5Q59GN2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
RPL39P5Q59GN2 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P5Q59GN2 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P5Q59GN2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 KLF2P3-201ENST00000451977 1087 ntBASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 RN7SL618P-201ENST00000477850 296 ntBASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 AC025678.2-201ENST00000562061 970 ntBASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 LINC01115-203ENST00000606068 577 ntBASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 AC073592.8-201ENST00000624126 511 ntBASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 AC007326.2-201ENST00000624224 7579 ntBASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.72□□□□□ -0.37
RPL39P5Q59GN2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RPL39P5Q59GN2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms