Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 AC074338.1-201ENST00000416825 156 ntBASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 ZNF890P-202ENST00000530367 1156 ntBASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 AL450472.2-201ENST00000603663 1156 ntBASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 AC097359.3-201ENST00000603982 1210 ntBASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 AC013726.1-201ENST00000563747 2285 ntBASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KHDC1Q4VXA5 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 AC079781.5-202ENST00000641784 3743 ntBASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 AC041040.2-201ENST00000622926 2899 ntBASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
KHDC1Q4VXA5 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 TARDBPP1-201ENST00000442013 1203 ntBASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 MIR4313-201ENST00000580760 101 ntBASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 AC015656.1-201ENST00000624209 3578 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms