| NPRL3 | Q12980 | RUNX3-201 | ENST00000308873 | 3861 nt | APPRIS P3 TSL 1 (best) BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | TMPRSS3-204 | ENST00000433957 | 2403 nt | APPRIS ALT1 TSL 1 (best) BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | PXYLP1-201 | ENST00000286353 | 3281 nt | APPRIS P1 TSL 1 (best) BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | ATG4B-206 | ENST00000405546 | 3294 nt | TSL 2 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | ALG9-201 | ENST00000398006 | 2345 nt | TSL 1 (best) BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | GSTO2-203 | ENST00000450629 | 1391 nt | TSL 5 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | C17orf107-201 | ENST00000381365 | 3199 nt | APPRIS P2 TSL 2 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | MAU2-201 | ENST00000262815 | 4994 nt | APPRIS P1 TSL 1 (best) BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | PLEKHA4-201 | ENST00000263265 | 3088 nt | APPRIS P1 TSL 1 (best) BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | CD37-201 | ENST00000323906 | 1265 nt | APPRIS P1 TSL 1 (best) BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | TMEM205-201 | ENST00000354882 | 1034 nt | APPRIS P1 TSL 1 (best) BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | TMEM239-202 | ENST00000380585 | 571 nt | APPRIS P1 TSL 1 (best) BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | AP1S3-202 | ENST00000396653 | 589 nt | TSL 4 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | ITGB2-204 | ENST00000397846 | 422 nt | TSL 2 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | CNN2P11-201 | ENST00000429351 | 262 nt | BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | LINC00899-202 | ENST00000444890 | 493 nt | TSL 3 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | NECTIN3-AS1-204 | ENST00000476301 | 568 nt | TSL 4 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | AC079140.1-201 | ENST00000508039 | 487 nt | BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | AC122138.1-201 | ENST00000508799 | 646 nt | TSL 2 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | STT3A-AS1-201 | ENST00000530526 | 429 nt | TSL 3 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | NDUFS7-216 | ENST00000546283 | 1060 nt | TSL 2 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | AP000275.2-202 | ENST00000553001 | 929 nt | TSL 5 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | TMEM205-205 | ENST00000586590 | 677 nt | APPRIS P1 TSL 5 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | TMEM205-207 | ENST00000586956 | 1003 nt | APPRIS P1 TSL 2 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | AC006116.8-201 | ENST00000587004 | 987 nt | TSL 2 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | AL121832.1-201 | ENST00000615180 | 677 nt | TSL 3 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | HNRNPH1-250 | ENST00000630639 | 123 nt | TSL 5 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | DIP2A-201 | ENST00000400274 | 7023 nt | APPRIS ALT2 TSL 5 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | MIRLET7BHG-203 | ENST00000435439 | 2264 nt | TSL 2 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | MSI2-206 | ENST00000579180 | 1635 nt | TSL 1 (best) BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | CCT3-201 | ENST00000295688 | 2150 nt | APPRIS P1 TSL 1 (best) BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | TBC1D2-203 | ENST00000375064 | 3174 nt | TSL 1 (best) BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | ACE3P-201 | ENST00000423435 | 1973 nt | BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | H2AFY-202 | ENST00000312469 | 1859 nt | TSL 5 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | TRIP6-209 | ENST00000619988 | 1303 nt | TSL 1 (best) BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | COL9A2-202 | ENST00000372748 | 2862 nt | APPRIS P1 TSL 1 (best) BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | ARHGEF28-202 | ENST00000296799 | 4424 nt | APPRIS ALT2 TSL 2 BASIC | 14.4 | □□□□□ -0.1 | | |
| NPRL3 | Q12980 | FRMD5-209 | ENST00000484674 | 2319 nt | TSL 2 BASIC | 14.4 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | NID1-201 | ENST00000264187 | 5864 nt | APPRIS P1 TSL 1 (best) BASIC | 14.4 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | MYH6-201 | ENST00000356287 | 5871 nt | APPRIS P1 TSL 1 (best) BASIC | 14.4 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | DIXDC1-201 | ENST00000440460 | 5897 nt | APPRIS P1 TSL 1 (best) BASIC | 14.4 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | MAN1B1-202 | ENST00000371589 | 2769 nt | APPRIS P1 TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | UNC5C-203 | ENST00000506749 | 2220 nt | TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | UHRF1-204 | ENST00000616255 | 2661 nt | APPRIS P1 TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | FBXO46-201 | ENST00000317683 | 3001 nt | APPRIS P1 TSL 2 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | FAM163A-201 | ENST00000341785 | 2909 nt | APPRIS P1 TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | AC008770.3-201 | ENST00000590798 | 1562 nt | APPRIS P1 TSL 2 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | ANKRD46-205 | ENST00000520311 | 3270 nt | APPRIS P1 TSL 2 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | SEPT9-228 | ENST00000590294 | 2816 nt | APPRIS ALT2 TSL 5 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | RAB3IP-204 | ENST00000378815 | 2386 nt | TSL 2 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | EYA4-205 | ENST00000430974 | 2364 nt | TSL 2 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | PUS1-202 | ENST00000376649 | 4094 nt | APPRIS P3 TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | ADCY2-201 | ENST00000338316 | 6575 nt | APPRIS P1 TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | HS6ST3-201 | ENST00000376705 | 7804 nt | APPRIS P1 TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | EEF1A1-202 | ENST00000316292 | 4441 nt | APPRIS P1 TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | PER2-201 | ENST00000254657 | 6385 nt | APPRIS P1 TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | CNTNAP3P2-201 | ENST00000617175 | 3861 nt | BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | DDX49-201 | ENST00000247003 | 1830 nt | APPRIS P1 TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | KIAA0930-203 | ENST00000391627 | 2623 nt | TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | AAK1-202 | ENST00000409068 | 2606 nt | TSL 2 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | RBPMS-201 | ENST00000287771 | 2974 nt | TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | LINC01184-204 | ENST00000501702 | 2977 nt | TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | PITPNM2-AS1-201 | ENST00000506255 | 2191 nt | TSL 2 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | IRAK1-203 | ENST00000369980 | 3666 nt | APPRIS P1 TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | WDR1-203 | ENST00000382452 | 3142 nt | APPRIS P1 TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | PRSS55-201 | ENST00000328655 | 1124 nt | APPRIS P1 TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | GSTO1-202 | ENST00000369713 | 972 nt | APPRIS P1 TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | C9orf116-202 | ENST00000371789 | 1278 nt | TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | CXCL1-201 | ENST00000395761 | 1097 nt | APPRIS P1 TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | AL451069.2-201 | ENST00000428814 | 297 nt | TSL 3 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | AC005237.2-201 | ENST00000434368 | 219 nt | BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | AL592309.1-201 | ENST00000443127 | 649 nt | BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | AP006288.1-201 | ENST00000446065 | 395 nt | BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | PHKG1P2-201 | ENST00000457537 | 863 nt | BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | TMEM176A-202 | ENST00000461345 | 635 nt | APPRIS ALT2 TSL 5 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | AC098859.1-201 | ENST00000502915 | 1238 nt | BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | SEC24B-AS1-203 | ENST00000505895 | 800 nt | TSL 4 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | SERF1A-207 | ENST00000512649 | 846 nt | TSL 2 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | AP000344.2-201 | ENST00000512987 | 629 nt | BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | AZIN1-AS1-212 | ENST00000520538 | 476 nt | TSL 3 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | RAB1B-202 | ENST00000527397 | 991 nt | TSL 3 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | RNF34-208 | ENST00000555076 | 593 nt | TSL 3 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | FAM227B-204 | ENST00000558594 | 1139 nt | APPRIS ALT2 TSL 5 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | AC009053.3-201 | ENST00000567148 | 574 nt | TSL 4 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | AC012173.1-201 | ENST00000567942 | 430 nt | TSL 3 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | AC104971.3-201 | ENST00000589794 | 335 nt | TSL 2 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | AC005330.1-201 | ENST00000590086 | 1238 nt | TSL 5 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | AC022145.2-201 | ENST00000598203 | 171 nt | BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | FSTL3-207 | ENST00000605925 | 748 nt | TSL 4 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | RAB9A-203 | ENST00000618931 | 737 nt | APPRIS P1 TSL 2 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | AC105339.1-204 | ENST00000636249 | 355 nt | BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | PITPNM1-216 | ENST00000534749 | 4189 nt | APPRIS P3 TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | ASAH1-221 | ENST00000636128 | 1608 nt | TSL 5 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | LINC01107-201 | ENST00000446979 | 1975 nt | TSL 2 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | KCND3-201 | ENST00000302127 | 2659 nt | APPRIS ALT1 TSL 5 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | CD8A-203 | ENST00000409511 | 3048 nt | APPRIS P4 TSL 2 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | UXT-AS1-201 | ENST00000590504 | 1525 nt | BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | CCDC28A-202 | ENST00000611852 | 1505 nt | TSL 1 (best) BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | SPATA6-204 | ENST00000396199 | 4964 nt | TSL 2 BASIC | 14.39 | □□□□□ -0.11 | | |
| NPRL3 | Q12980 | INTS4P1-203 | ENST00000641008 | 3683 nt | BASIC | 14.39 | □□□□□ -0.11 | | |