Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDN8P56748 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN8P56748 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN8P56748 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CLDN8P56748 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CLDN8P56748 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDN8P56748 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN8P56748 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN8P56748 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN8P56748 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN8P56748 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
CLDN8P56748 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDN8P56748 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN8P56748 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDN8P56748 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN8P56748 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CLDN8P56748 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN8P56748 BX842568.4-201ENST00000421222 227 ntBASIC14.74□□□□□ -0.05
CLDN8P56748 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDN8P56748 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDN8P56748 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDN8P56748 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.74□□□□□ -0.05
CLDN8P56748 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.74□□□□□ -0.05
CLDN8P56748 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDN8P56748 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN8P56748 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.74□□□□□ -0.05
CLDN8P56748 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN8P56748 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN8P56748 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CLDN8P56748 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN8P56748 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN8P56748 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN8P56748 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CLDN8P56748 AC005912.2-201ENST00000619492 2400 ntBASIC14.74□□□□□ -0.05
CLDN8P56748 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN8P56748 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDN8P56748 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDN8P56748 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.74□□□□□ -0.05
CLDN8P56748 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CLDN8P56748 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CLDN8P56748 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.73□□□□□ -0.05
CLDN8P56748 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CLDN8P56748 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.73□□□□□ -0.05
CLDN8P56748 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.73□□□□□ -0.05
CLDN8P56748 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.73□□□□□ -0.05
CLDN8P56748 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.73□□□□□ -0.05
CLDN8P56748 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.73□□□□□ -0.05
CLDN8P56748 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 KRT18P43-201ENST00000469825 1281 ntBASIC14.73□□□□□ -0.05
CLDN8P56748 HLA-V-204ENST00000476601 1289 ntBASIC14.73□□□□□ -0.05
CLDN8P56748 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
CLDN8P56748 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.73□□□□□ -0.05
CLDN8P56748 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.73□□□□□ -0.05
CLDN8P56748 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.73□□□□□ -0.05
CLDN8P56748 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.73□□□□□ -0.05
CLDN8P56748 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
CLDN8P56748 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.73□□□□□ -0.05
CLDN8P56748 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CLDN8P56748 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDN8P56748 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CLDN8P56748 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.73□□□□□ -0.05
CLDN8P56748 AC140479.7-201ENST00000636301 2332 ntBASIC14.72□□□□□ -0.05
CLDN8P56748 REXO1L4P-201ENST00000605109 1937 ntBASIC14.72□□□□□ -0.05
CLDN8P56748 AL121723.1-201ENST00000445194 1519 ntBASIC14.72□□□□□ -0.05
CLDN8P56748 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN8P56748 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.72□□□□□ -0.05
CLDN8P56748 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN8P56748 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN8P56748 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN8P56748 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN8P56748 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN8P56748 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN8P56748 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.72□□□□□ -0.05
CLDN8P56748 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN8P56748 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN8P56748 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CLDN8P56748 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN8P56748 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN8P56748 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CLDN8P56748 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDN8P56748 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms