Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 AC084121.3-201ENST00000641716 218 ntBASIC13.77□□□□□ -0.21
SLC25A1P53007 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC25A1P53007 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC25A1P53007 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC25A1P53007 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SLC25A1P53007 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SLC25A1P53007 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SLC25A1P53007 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SLC25A1P53007 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.77□□□□□ -0.21
SLC25A1P53007 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SLC25A1P53007 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 AC026748.1-201ENST00000624349 3251 ntBASIC13.76□□□□□ -0.21
SLC25A1P53007 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.76□□□□□ -0.21
SLC25A1P53007 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SLC25A1P53007 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SLC25A1P53007 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 AC211486.1-202ENST00000416371 468 ntBASIC13.76□□□□□ -0.21
SLC25A1P53007 AC254562.1-201ENST00000417586 456 ntBASIC13.76□□□□□ -0.21
SLC25A1P53007 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.76□□□□□ -0.21
SLC25A1P53007 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.76□□□□□ -0.21
SLC25A1P53007 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.76□□□□□ -0.21
SLC25A1P53007 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 AC211476.1-201ENST00000503899 468 ntBASIC13.76□□□□□ -0.21
SLC25A1P53007 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.76□□□□□ -0.21
SLC25A1P53007 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.76□□□□□ -0.21
SLC25A1P53007 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
SLC25A1P53007 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.76□□□□□ -0.21
SLC25A1P53007 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
SLC25A1P53007 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.76□□□□□ -0.21
SLC25A1P53007 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SLC25A1P53007 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SLC25A1P53007 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SLC25A1P53007 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.76□□□□□ -0.21
SLC25A1P53007 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.76□□□□□ -0.21
SLC25A1P53007 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SLC25A1P53007 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.76□□□□□ -0.21
SLC25A1P53007 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 MYO15B-237ENST00000642007 4893 ntBASIC13.75□□□□□ -0.21
SLC25A1P53007 AC005912.2-201ENST00000619492 2400 ntBASIC13.75□□□□□ -0.21
SLC25A1P53007 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 AC140479.7-201ENST00000636301 2332 ntBASIC13.75□□□□□ -0.21
SLC25A1P53007 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SLC25A1P53007 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SLC25A1P53007 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.75□□□□□ -0.21
SLC25A1P53007 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.75□□□□□ -0.21
SLC25A1P53007 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
SLC25A1P53007 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SLC25A1P53007 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SLC25A1P53007 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SLC25A1P53007 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 BX842568.4-201ENST00000421222 227 ntBASIC13.75□□□□□ -0.21
SLC25A1P53007 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.75□□□□□ -0.21
SLC25A1P53007 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SLC25A1P53007 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.75□□□□□ -0.21
SLC25A1P53007 LINC01115-203ENST00000606068 577 ntBASIC13.75□□□□□ -0.21
SLC25A1P53007 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.75□□□□□ -0.21
SLC25A1P53007 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
SLC25A1P53007 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.75□□□□□ -0.21
SLC25A1P53007 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.75□□□□□ -0.21
SLC25A1P53007 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.75□□□□□ -0.21
SLC25A1P53007 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SLC25A1P53007 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms