Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCK1P35558 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
PCK1P35558 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCK1P35558 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCK1P35558 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
PCK1P35558 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCK1P35558 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCK1P35558 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCK1P35558 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCK1P35558 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCK1P35558 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCK1P35558 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.38■□□□□ 0.21
PCK1P35558 RPL5P21-201ENST00000404620 815 ntBASIC16.38■□□□□ 0.21
PCK1P35558 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCK1P35558 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.38■□□□□ 0.21
PCK1P35558 RN7SL618P-201ENST00000477850 296 ntBASIC16.38■□□□□ 0.21
PCK1P35558 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.38■□□□□ 0.21
PCK1P35558 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.38■□□□□ 0.21
PCK1P35558 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.38■□□□□ 0.21
PCK1P35558 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.38■□□□□ 0.21
PCK1P35558 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCK1P35558 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.38■□□□□ 0.21
PCK1P35558 AL158211.3-201ENST00000607385 239 ntBASIC16.38■□□□□ 0.21
PCK1P35558 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.38■□□□□ 0.21
PCK1P35558 AC093028.1-201ENST00000622998 982 ntBASIC16.38■□□□□ 0.21
PCK1P35558 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.38■□□□□ 0.21
PCK1P35558 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.38■□□□□ 0.21
PCK1P35558 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PCK1P35558 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.38■□□□□ 0.21
PCK1P35558 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCK1P35558 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCK1P35558 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCK1P35558 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCK1P35558 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.38■□□□□ 0.21
PCK1P35558 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCK1P35558 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.38■□□□□ 0.21
PCK1P35558 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCK1P35558 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCK1P35558 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.38■□□□□ 0.21
PCK1P35558 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.38■□□□□ 0.21
PCK1P35558 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.37■□□□□ 0.21
PCK1P35558 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCK1P35558 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
PCK1P35558 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
PCK1P35558 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PCK1P35558 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCK1P35558 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.37■□□□□ 0.21
PCK1P35558 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.37■□□□□ 0.21
PCK1P35558 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCK1P35558 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
PCK1P35558 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.37■□□□□ 0.21
PCK1P35558 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCK1P35558 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 RPL13P2-201ENST00000440687 659 ntBASIC16.37■□□□□ 0.21
PCK1P35558 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.37■□□□□ 0.21
PCK1P35558 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.37■□□□□ 0.21
PCK1P35558 ZNF890P-202ENST00000530367 1156 ntBASIC16.37■□□□□ 0.21
PCK1P35558 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.37■□□□□ 0.21
PCK1P35558 AC087499.5-201ENST00000452760 1342 ntBASIC16.37■□□□□ 0.21
PCK1P35558 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.37■□□□□ 0.21
PCK1P35558 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.37■□□□□ 0.21
PCK1P35558 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.37■□□□□ 0.21
PCK1P35558 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCK1P35558 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.37■□□□□ 0.21
PCK1P35558 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCK1P35558 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCK1P35558 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.36■□□□□ 0.21
PCK1P35558 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.36■□□□□ 0.21
PCK1P35558 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCK1P35558 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.36■□□□□ 0.21
PCK1P35558 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PCK1P35558 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCK1P35558 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCK1P35558 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCK1P35558 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms