Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
GABRA3P34903 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GABRA3P34903 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
GABRA3P34903 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.44□□□□□ -0.1
GABRA3P34903 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
GABRA3P34903 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
GABRA3P34903 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
GABRA3P34903 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
GABRA3P34903 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
GABRA3P34903 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
GABRA3P34903 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.43□□□□□ -0.1
GABRA3P34903 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.43□□□□□ -0.1
GABRA3P34903 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.43□□□□□ -0.1
GABRA3P34903 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.43□□□□□ -0.1
GABRA3P34903 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.43□□□□□ -0.1
GABRA3P34903 AC025181.2-201ENST00000606994 802 ntBASIC14.43□□□□□ -0.1
GABRA3P34903 AC007326.2-201ENST00000624224 7579 ntBASIC14.43□□□□□ -0.1
GABRA3P34903 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
GABRA3P34903 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
GABRA3P34903 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.43□□□□□ -0.1
GABRA3P34903 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.43□□□□□ -0.1
GABRA3P34903 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
GABRA3P34903 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.43□□□□□ -0.1
GABRA3P34903 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
GABRA3P34903 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GABRA3P34903 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
GABRA3P34903 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
GABRA3P34903 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
GABRA3P34903 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.42□□□□□ -0.1
GABRA3P34903 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.42□□□□□ -0.1
GABRA3P34903 AL596257.1-201ENST00000641463 2694 ntBASIC14.42□□□□□ -0.1
GABRA3P34903 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.42□□□□□ -0.1
GABRA3P34903 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.42□□□□□ -0.1
GABRA3P34903 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.42□□□□□ -0.1
GABRA3P34903 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.42□□□□□ -0.1
GABRA3P34903 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.42□□□□□ -0.1
GABRA3P34903 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.42□□□□□ -0.1
GABRA3P34903 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
GABRA3P34903 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.42□□□□□ -0.1
GABRA3P34903 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.42□□□□□ -0.1
GABRA3P34903 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.42□□□□□ -0.1
GABRA3P34903 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.42□□□□□ -0.1
GABRA3P34903 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.42□□□□□ -0.1
GABRA3P34903 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.42□□□□□ -0.1
GABRA3P34903 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.42□□□□□ -0.1
GABRA3P34903 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.42□□□□□ -0.1
GABRA3P34903 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GABRA3P34903 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.42□□□□□ -0.1
GABRA3P34903 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA3P34903 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GABRA3P34903 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA3P34903 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA3P34903 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA3P34903 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.41□□□□□ -0.1
GABRA3P34903 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.41□□□□□ -0.1
GABRA3P34903 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GABRA3P34903 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GABRA3P34903 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms