Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 TCIRG1-216ENST00000534673 848 ntTSL 320.1■□□□□ 0.814e-12■□□□□ 10.2
RPS3P23396 TCIRG1-209ENST00000529657 842 ntTSL 519.64■□□□□ 0.734e-12■□□□□ 10.2
RPS3P23396 TCIRG1-202ENST00000524598 940 ntTSL 517.09■□□□□ 0.334e-12■□□□□ 10.2
RPS3P23396 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC11.64□□□□□ -0.551e-7■□□□□ 10.2
RPS3P23396 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.92□□□□□ -0.023e-13■□□□□ 10.2
RPS3P23396 HNRNPU-212ENST00000638230 1922 ntTSL 511.92□□□□□ -0.53e-13■□□□□ 10.2
RPS3P23396 FKBP1A-207ENST00000474657 641 ntTSL 211.82□□□□□ -0.523e-13■□□□□ 10.2
RPS3P23396 HNRNPU-221ENST00000639824 1450 ntTSL 511.23□□□□□ -0.613e-13■□□□□ 10.2
RPS3P23396 HNRNPU-224ENST00000640056 2045 ntTSL 59.67□□□□□ -0.863e-13■□□□□ 10.2
RPS3P23396 HNRNPU-202ENST00000366525 2851 ntTSL 59.51□□□□□ -0.893e-13■□□□□ 10.2
RPS3P23396 HNRNPU-216ENST00000638716 2640 ntTSL 5 BASIC9.34□□□□□ -0.913e-13■□□□□ 10.2
RPS3P23396 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC8.36□□□□□ -1.073e-13■□□□□ 10.2
RPS3P23396 HNRNPU-222ENST00000639880 4239 ntTSL 58.08□□□□□ -1.123e-13■□□□□ 10.2
RPS3P23396 HNRNPU-207ENST00000468690 5273 ntTSL 57.6□□□□□ -1.193e-13■□□□□ 10.2
RPS3P23396 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.55□□□□□ -1.23e-13■□□□□ 10.2
RPS3P23396 HNRNPU-213ENST00000638301 3650 ntTSL 56.54□□□□□ -1.363e-13■□□□□ 10.2
RPS3P23396 HNRNPU-220ENST00000639667 3940 ntTSL 25.67□□□□□ -1.53e-13■□□□□ 10.2
RPS3P23396 FKBP1A-208ENST00000474726 551 ntTSL 35.56□□□□□ -1.523e-13■□□□□ 10.2
RPS3P23396 HNRNPU-210ENST00000483966 1069 ntTSL 23.27□□□□□ -1.893e-13■□□□□ 10.2
RPS3P23396 RALY-205ENST00000442805 871 ntTSL 524.15■■□□□ 1.466e-10■□□□□ 10.1
RPS3P23396 RALY-206ENST00000448364 1204 ntTSL 223.53■■□□□ 1.366e-10■□□□□ 10.1
RPS3P23396 RALY-202ENST00000333552 786 ntTSL 320.85■□□□□ 0.936e-10■□□□□ 10.1
RPS3P23396 RALY-210ENST00000493399 513 ntTSL 514.23□□□□□ -0.136e-10■□□□□ 10.1
RPS3P23396 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.35■■□□□ 1.494e-7■□□□□ 10.1
RPS3P23396 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.294e-7■□□□□ 10.1
RPS3P23396 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.174e-7■□□□□ 10.1
RPS3P23396 PKP3-206ENST00000528036 940 ntTSL 222.38■■□□□ 1.173e-6■□□□□ 10.1
RPS3P23396 PKP3-210ENST00000533249 1111 ntTSL 321.81■■□□□ 1.083e-6■□□□□ 10.1
RPS3P23396 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 14e-7■□□□□ 10.1
RPS3P23396 CXXC5-209ENST00000507139 472 ntTSL 420.81■□□□□ 0.928e-9■□□□□ 10.1
RPS3P23396 PKP3-205ENST00000527442 847 ntTSL 320.48■□□□□ 0.873e-6■□□□□ 10.1
RPS3P23396 TXNRD2-217ENST00000496729 910 ntTSL 418.99■□□□□ 0.633e-6■□□□□ 10.1
RPS3P23396 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.626e-8■□□□□ 10.1
RPS3P23396 IFRD1-206ENST00000432734 574 ntTSL 418.93■□□□□ 0.626e-8■□□□□ 10.1
RPS3P23396 CNN2-209ENST00000568865 1332 ntTSL 518.62■□□□□ 0.578e-9■□□□□ 10.1
RPS3P23396 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.543e-6■□□□□ 10.1
RPS3P23396 IFRD1-209ENST00000445335 570 ntTSL 417.91■□□□□ 0.466e-8■□□□□ 10.1
RPS3P23396 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.443e-6■□□□□ 10.1
RPS3P23396 ACADVL-209ENST00000578033 562 ntTSL 217.54■□□□□ 0.41e-8■□□□□ 10.1
RPS3P23396 IP6K2-212ENST00000433104 2490 ntTSL 217.09■□□□□ 0.333e-6■□□□□ 10.1
RPS3P23396 IP6K2-227ENST00000479914 1077 ntTSL 1 (best)16.77■□□□□ 0.283e-6■□□□□ 10.1
RPS3P23396 RSRP1-208ENST00000561867 477 ntAPPRIS ALT2 TSL 316.36■□□□□ 0.213e-6■□□□□ 10.1
RPS3P23396 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.33■□□□□ 0.23e-6■□□□□ 10.1
RPS3P23396 PRMT1-209ENST00000527866 968 ntTSL 216.07■□□□□ 0.169e-9■□□□□ 10.1
RPS3P23396 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.166e-8■□□□□ 10.1
RPS3P23396 SLC4A2-217ENST00000493040 556 ntTSL 415.74■□□□□ 0.114e-7■□□□□ 10.1
RPS3P23396 SLC4A2-203ENST00000460010 551 ntTSL 415.66■□□□□ 0.14e-7■□□□□ 10.1
RPS3P23396 SLC4A2-211ENST00000482697 383 ntTSL 315.66■□□□□ 0.14e-7■□□□□ 10.1
RPS3P23396 LTBP4-225ENST00000599225 281 ntTSL 315.59■□□□□ 0.093e-6■□□□□ 10.1
RPS3P23396 AAAS-216ENST00000550033 900 ntTSL 315.53■□□□□ 0.083e-6■□□□□ 10.1
RPS3P23396 MRPS25-204ENST00000447299 723 ntTSL 315.38■□□□□ 0.053e-6■□□□□ 10.1
RPS3P23396 RSRP1-220ENST00000568996 480 ntAPPRIS ALT2 TSL 315.17■□□□□ 0.023e-6■□□□□ 10.1
RPS3P23396 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.14■□□□□ 0.018e-9■□□□□ 10.1
RPS3P23396 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.013e-6■□□□□ 10.1
RPS3P23396 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.09■□□□□ 0.013e-6■□□□□ 10.1
RPS3P23396 LTBP4-220ENST00000598166 699 ntTSL 514.96□□□□□ -0.013e-6■□□□□ 10.1
RPS3P23396 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.023e-6■□□□□ 10.1
RPS3P23396 DAZAP1-210ENST00000592453 1021 ntTSL 514.89□□□□□ -0.034e-7■□□□□ 10.1
RPS3P23396 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.048e-9■□□□□ 10.1
RPS3P23396 IFRD1-203ENST00000417662 429 ntTSL 314.77□□□□□ -0.056e-8■□□□□ 10.1
RPS3P23396 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.053e-6■□□□□ 10.1
RPS3P23396 CNN2-206ENST00000564572 2266 nt14.4□□□□□ -0.18e-9■□□□□ 10.1
RPS3P23396 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.128e-9■□□□□ 10.1
RPS3P23396 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.31□□□□□ -0.128e-9■□□□□ 10.1
RPS3P23396 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.123e-6■□□□□ 10.1
RPS3P23396 CMTR1-203ENST00000457419 769 ntTSL 314.25□□□□□ -0.133e-6■□□□□ 10.1
RPS3P23396 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.148e-9■□□□□ 10.1
RPS3P23396 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.19□□□□□ -0.143e-6■□□□□ 10.1
RPS3P23396 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.18□□□□□ -0.143e-6■□□□□ 10.1
RPS3P23396 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.98□□□□□ -0.173e-6■□□□□ 10.1
RPS3P23396 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.78□□□□□ -0.28e-9■□□□□ 10.1
RPS3P23396 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC13.7□□□□□ -0.223e-6■□□□□ 10.1
RPS3P23396 WDR36-202ENST00000505303 2126 ntTSL 513.6□□□□□ -0.234e-7■□□□□ 10.1
RPS3P23396 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.263e-6■□□□□ 10.1
RPS3P23396 DAZAP1-208ENST00000589874 3642 nt13.39□□□□□ -0.274e-7■□□□□ 10.1
RPS3P23396 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.39□□□□□ -0.276e-8■□□□□ 10.1
RPS3P23396 IP6K2-207ENST00000416707 1260 ntTSL 1 (best)13.3□□□□□ -0.283e-6■□□□□ 10.1
RPS3P23396 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC12.85□□□□□ -0.353e-6■□□□□ 10.1
RPS3P23396 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC12.8□□□□□ -0.363e-6■□□□□ 10.1
RPS3P23396 IP6K2-220ENST00000449563 580 ntTSL 412.77□□□□□ -0.373e-6■□□□□ 10.1
RPS3P23396 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.373e-6■□□□□ 10.1
RPS3P23396 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC12.4□□□□□ -0.424e-7■□□□□ 10.1
RPS3P23396 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC12.38□□□□□ -0.434e-7■□□□□ 10.1
RPS3P23396 DAZAP1-203ENST00000585485 3943 ntTSL 212.37□□□□□ -0.434e-7■□□□□ 10.1
RPS3P23396 UCP2-209ENST00000545212 389 ntTSL 312.29□□□□□ -0.444e-7■□□□□ 10.1
RPS3P23396 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC12.21□□□□□ -0.453e-6■□□□□ 10.1
RPS3P23396 IP6K2-209ENST00000424035 568 ntTSL 412.15□□□□□ -0.463e-6■□□□□ 10.1
RPS3P23396 IP6K2-214ENST00000436134 631 ntTSL 312.15□□□□□ -0.463e-6■□□□□ 10.1
RPS3P23396 DAZAP1-207ENST00000589484 3414 ntTSL 212.12□□□□□ -0.474e-7■□□□□ 10.1
RPS3P23396 IP6K2-222ENST00000450045 689 ntTSL 3 BASIC12□□□□□ -0.493e-6■□□□□ 10.1
RPS3P23396 IP6K2-224ENST00000454335 631 ntTSL 412□□□□□ -0.493e-6■□□□□ 10.1
RPS3P23396 IP6K2-206ENST00000413654 553 ntTSL 411.98□□□□□ -0.493e-6■□□□□ 10.1
RPS3P23396 IP6K2-213ENST00000434860 560 ntTSL 411.98□□□□□ -0.493e-6■□□□□ 10.1
RPS3P23396 IP6K2-225ENST00000455545 539 ntTSL 311.91□□□□□ -0.53e-6■□□□□ 10.1
RPS3P23396 ABI1-203ENST00000376137 3467 ntTSL 1 (best) BASIC11.9□□□□□ -0.514e-7■□□□□ 10.1
RPS3P23396 MRPS25-202ENST00000420267 590 ntTSL 411.88□□□□□ -0.513e-6■□□□□ 10.1
RPS3P23396 ACADVL-235ENST00000583848 503 ntTSL 311.85□□□□□ -0.511e-8■□□□□ 10.1
RPS3P23396 CNN2-207ENST00000565096 2109 ntTSL 2 BASIC11.79□□□□□ -0.528e-9■□□□□ 10.1
RPS3P23396 WDR36-205ENST00000515784 562 ntTSL 211.74□□□□□ -0.534e-7■□□□□ 10.1
RPS3P23396 PPM1F-205ENST00000445205 650 ntTSL 511.49□□□□□ -0.578e-9■□□□□ 10.1
Retrieved 100 of 24,271 protein–RNA pairs in 327.9 ms