Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.49■□□□□ 0.07
XRCC1P18887 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.49■□□□□ 0.07
XRCC1P18887 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.49■□□□□ 0.07
XRCC1P18887 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
XRCC1P18887 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
XRCC1P18887 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.49■□□□□ 0.07
XRCC1P18887 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.49■□□□□ 0.07
XRCC1P18887 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.49■□□□□ 0.07
XRCC1P18887 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.49■□□□□ 0.07
XRCC1P18887 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.49■□□□□ 0.07
XRCC1P18887 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.49■□□□□ 0.07
XRCC1P18887 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
XRCC1P18887 TP53TG3HP-202ENST00000569755 579 ntBASIC15.49■□□□□ 0.07
XRCC1P18887 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.49■□□□□ 0.07
XRCC1P18887 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
XRCC1P18887 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.49■□□□□ 0.07
XRCC1P18887 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.49■□□□□ 0.07
XRCC1P18887 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
XRCC1P18887 REXO1L1P-202ENST00000608646 1974 ntBASIC15.49■□□□□ 0.07
XRCC1P18887 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.49■□□□□ 0.07
XRCC1P18887 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
XRCC1P18887 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
XRCC1P18887 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.48■□□□□ 0.07
XRCC1P18887 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
XRCC1P18887 AC105250.1-201ENST00000509378 2057 ntBASIC15.48■□□□□ 0.07
XRCC1P18887 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
XRCC1P18887 AC139749.1-202ENST00000617529 3139 ntBASIC15.48■□□□□ 0.07
XRCC1P18887 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
XRCC1P18887 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.48■□□□□ 0.07
XRCC1P18887 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.48■□□□□ 0.07
XRCC1P18887 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
XRCC1P18887 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.48■□□□□ 0.07
XRCC1P18887 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.48■□□□□ 0.07
XRCC1P18887 MEIS3P1-201ENST00000495167 958 ntBASIC15.48■□□□□ 0.07
XRCC1P18887 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.48■□□□□ 0.07
XRCC1P18887 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.48■□□□□ 0.07
XRCC1P18887 TPRX2P-201ENST00000535362 881 ntBASIC15.48■□□□□ 0.07
XRCC1P18887 AC005225.4-201ENST00000557330 545 ntBASIC15.48■□□□□ 0.07
XRCC1P18887 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
XRCC1P18887 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.48■□□□□ 0.07
XRCC1P18887 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.48■□□□□ 0.07
XRCC1P18887 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
XRCC1P18887 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.48■□□□□ 0.07
XRCC1P18887 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 SLC7A15P-201ENST00000424028 1363 ntBASIC15.48■□□□□ 0.07
XRCC1P18887 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
XRCC1P18887 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
XRCC1P18887 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.47■□□□□ 0.07
XRCC1P18887 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.47■□□□□ 0.07
XRCC1P18887 AC112693.3-201ENST00000624819 1983 ntBASIC15.47■□□□□ 0.07
XRCC1P18887 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
XRCC1P18887 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
XRCC1P18887 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.47■□□□□ 0.07
XRCC1P18887 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.47■□□□□ 0.07
XRCC1P18887 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
XRCC1P18887 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
XRCC1P18887 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
XRCC1P18887 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
XRCC1P18887 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms