Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CD48P09326 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD48P09326 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CD48P09326 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.05■□□□□ 0.16
CD48P09326 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD48P09326 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD48P09326 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.04■□□□□ 0.16
CD48P09326 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CD48P09326 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CD48P09326 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.04■□□□□ 0.16
CD48P09326 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.04■□□□□ 0.16
CD48P09326 REXO1L4P-201ENST00000605109 1937 ntBASIC16.04■□□□□ 0.16
CD48P09326 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CD48P09326 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.04■□□□□ 0.16
CD48P09326 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.04■□□□□ 0.16
CD48P09326 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.04■□□□□ 0.16
CD48P09326 MEIS3P1-201ENST00000495167 958 ntBASIC16.04■□□□□ 0.16
CD48P09326 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.04■□□□□ 0.16
CD48P09326 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.04■□□□□ 0.16
CD48P09326 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.04■□□□□ 0.16
CD48P09326 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.04■□□□□ 0.16
CD48P09326 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CD48P09326 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.04■□□□□ 0.16
CD48P09326 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CD48P09326 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CD48P09326 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CD48P09326 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.04■□□□□ 0.16
CD48P09326 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.04■□□□□ 0.16
CD48P09326 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CD48P09326 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CD48P09326 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CD48P09326 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.04■□□□□ 0.16
CD48P09326 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.04■□□□□ 0.16
CD48P09326 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.04■□□□□ 0.16
CD48P09326 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CD48P09326 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CD48P09326 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.03■□□□□ 0.16
CD48P09326 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.03■□□□□ 0.16
CD48P09326 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CD48P09326 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.03■□□□□ 0.16
CD48P09326 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.03■□□□□ 0.16
CD48P09326 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
CD48P09326 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.03■□□□□ 0.16
CD48P09326 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.03■□□□□ 0.16
CD48P09326 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.03■□□□□ 0.16
CD48P09326 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
CD48P09326 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.03■□□□□ 0.16
CD48P09326 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
CD48P09326 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CD48P09326 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CD48P09326 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.03■□□□□ 0.16
CD48P09326 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD48P09326 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD48P09326 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD48P09326 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD48P09326 WASH3P-207ENST00000560956 1394 ntBASIC16.02■□□□□ 0.16
CD48P09326 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms