Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.8□□□□□ -0.2
PFDN1O60925 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 ACE3P-201ENST00000423435 1973 ntBASIC13.8□□□□□ -0.2
PFDN1O60925 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.8□□□□□ -0.2
PFDN1O60925 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
PFDN1O60925 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 AC239809.2-201ENST00000415381 517 ntBASIC13.8□□□□□ -0.2
PFDN1O60925 AC096633.1-201ENST00000422446 749 ntBASIC13.8□□□□□ -0.2
PFDN1O60925 AC011506.1-201ENST00000474329 610 ntBASIC13.8□□□□□ -0.2
PFDN1O60925 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.8□□□□□ -0.2
PFDN1O60925 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.8□□□□□ -0.2
PFDN1O60925 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.8□□□□□ -0.2
PFDN1O60925 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
PFDN1O60925 AL353708.3-201ENST00000610272 989 ntBASIC13.8□□□□□ -0.2
PFDN1O60925 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 CR392000.1-201ENST00000624770 1228 ntBASIC13.8□□□□□ -0.2
PFDN1O60925 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.8□□□□□ -0.2
PFDN1O60925 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.8□□□□□ -0.2
PFDN1O60925 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC13.8□□□□□ -0.2
PFDN1O60925 AL445209.1-201ENST00000607269 3491 ntBASIC13.8□□□□□ -0.2
PFDN1O60925 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.8□□□□□ -0.2
PFDN1O60925 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
PFDN1O60925 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 KRT8P39-201ENST00000396270 1433 ntBASIC13.8□□□□□ -0.2
PFDN1O60925 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.8□□□□□ -0.2
PFDN1O60925 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
PFDN1O60925 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PFDN1O60925 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.8□□□□□ -0.2
PFDN1O60925 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PFDN1O60925 AC018529.2-202ENST00000611482 3087 ntBASIC13.79□□□□□ -0.2
PFDN1O60925 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PFDN1O60925 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.79□□□□□ -0.2
PFDN1O60925 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.79□□□□□ -0.2
PFDN1O60925 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.79□□□□□ -0.2
PFDN1O60925 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
PFDN1O60925 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.79□□□□□ -0.2
PFDN1O60925 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
PFDN1O60925 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PFDN1O60925 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.79□□□□□ -0.2
PFDN1O60925 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.79□□□□□ -0.2
PFDN1O60925 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.79□□□□□ -0.2
PFDN1O60925 B3GAT3P1-201ENST00000471720 806 ntBASIC13.79□□□□□ -0.2
PFDN1O60925 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
PFDN1O60925 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.79□□□□□ -0.2
PFDN1O60925 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.79□□□□□ -0.2
PFDN1O60925 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.79□□□□□ -0.2
PFDN1O60925 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.79□□□□□ -0.2
PFDN1O60925 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.79□□□□□ -0.2
PFDN1O60925 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PFDN1O60925 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.79□□□□□ -0.2
PFDN1O60925 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
PFDN1O60925 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
PFDN1O60925 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.79□□□□□ -0.2
PFDN1O60925 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PFDN1O60925 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.79□□□□□ -0.2
PFDN1O60925 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PFDN1O60925 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC13.78□□□□□ -0.2
PFDN1O60925 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms