Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.58□□□□□ -0.08
PRAMEF2O60811 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.58□□□□□ -0.08
PRAMEF2O60811 AC015910.1-201ENST00000579400 975 ntBASIC14.58□□□□□ -0.08
PRAMEF2O60811 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.58□□□□□ -0.08
PRAMEF2O60811 TMEM261P1-201ENST00000604899 340 ntBASIC14.58□□□□□ -0.08
PRAMEF2O60811 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.58□□□□□ -0.08
PRAMEF2O60811 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.58□□□□□ -0.08
PRAMEF2O60811 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRAMEF2O60811 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PRAMEF2O60811 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.58□□□□□ -0.08
PRAMEF2O60811 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PRAMEF2O60811 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PRAMEF2O60811 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRAMEF2O60811 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PRAMEF2O60811 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRAMEF2O60811 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRAMEF2O60811 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PRAMEF2O60811 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PRAMEF2O60811 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 AC009090.5-201ENST00000624886 2285 ntBASIC14.57□□□□□ -0.08
PRAMEF2O60811 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 AC098850.1-201ENST00000419919 790 ntBASIC14.57□□□□□ -0.08
PRAMEF2O60811 TTTY23B-201ENST00000442790 549 ntBASIC14.57□□□□□ -0.08
PRAMEF2O60811 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 RN7SL837P-201ENST00000463010 287 ntBASIC14.57□□□□□ -0.08
PRAMEF2O60811 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 AL162274.1-201ENST00000617191 1098 ntBASIC14.57□□□□□ -0.08
PRAMEF2O60811 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PRAMEF2O60811 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PRAMEF2O60811 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.57□□□□□ -0.08
PRAMEF2O60811 AC136621.1-201ENST00000624017 2304 ntBASIC14.57□□□□□ -0.08
PRAMEF2O60811 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PRAMEF2O60811 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PRAMEF2O60811 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PRAMEF2O60811 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PRAMEF2O60811 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PRAMEF2O60811 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PRAMEF2O60811 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.56□□□□□ -0.08
PRAMEF2O60811 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PRAMEF2O60811 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PRAMEF2O60811 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PRAMEF2O60811 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PRAMEF2O60811 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PRAMEF2O60811 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PRAMEF2O60811 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PRAMEF2O60811 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.56□□□□□ -0.08
PRAMEF2O60811 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.56□□□□□ -0.08
PRAMEF2O60811 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.56□□□□□ -0.08
PRAMEF2O60811 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PRAMEF2O60811 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.56□□□□□ -0.08
PRAMEF2O60811 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.56□□□□□ -0.08
PRAMEF2O60811 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
PRAMEF2O60811 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
PRAMEF2O60811 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PRAMEF2O60811 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.56□□□□□ -0.08
PRAMEF2O60811 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
PRAMEF2O60811 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.56□□□□□ -0.08
PRAMEF2O60811 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PRAMEF2O60811 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
PRAMEF2O60811 RPL5P21-201ENST00000404620 815 ntBASIC14.56□□□□□ -0.08
PRAMEF2O60811 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms