Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXN1O15353 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC18.44■□□□□ 0.54
FOXN1O15353 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
FOXN1O15353 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.44■□□□□ 0.54
FOXN1O15353 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
FOXN1O15353 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN1O15353 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN1O15353 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN1O15353 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
FOXN1O15353 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN1O15353 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.44■□□□□ 0.54
FOXN1O15353 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
FOXN1O15353 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN1O15353 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN1O15353 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
FOXN1O15353 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.44■□□□□ 0.54
FOXN1O15353 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXN1O15353 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN1O15353 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN1O15353 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXN1O15353 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXN1O15353 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN1O15353 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN1O15353 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN1O15353 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.43■□□□□ 0.54
FOXN1O15353 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
FOXN1O15353 MIR1202-201ENST00000408529 83 ntBASIC18.43■□□□□ 0.54
FOXN1O15353 AC007274.2-201ENST00000421675 662 ntBASIC18.43■□□□□ 0.54
FOXN1O15353 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.43■□□□□ 0.54
FOXN1O15353 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN1O15353 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.43■□□□□ 0.54
FOXN1O15353 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.43■□□□□ 0.54
FOXN1O15353 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
FOXN1O15353 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.43■□□□□ 0.54
FOXN1O15353 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC18.43■□□□□ 0.54
FOXN1O15353 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.43■□□□□ 0.54
FOXN1O15353 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXN1O15353 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN1O15353 AP003680.1-201ENST00000598970 3660 ntBASIC18.43■□□□□ 0.54
FOXN1O15353 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
FOXN1O15353 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXN1O15353 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXN1O15353 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN1O15353 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXN1O15353 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN1O15353 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
FOXN1O15353 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN1O15353 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
FOXN1O15353 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN1O15353 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN1O15353 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXN1O15353 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
FOXN1O15353 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXN1O15353 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
FOXN1O15353 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
FOXN1O15353 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN1O15353 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN1O15353 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
FOXN1O15353 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
FOXN1O15353 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN1O15353 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXN1O15353 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN1O15353 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN1O15353 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN1O15353 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
FOXN1O15353 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
FOXN1O15353 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXN1O15353 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN1O15353 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXN1O15353 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXN1O15353 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN1O15353 MSRA-203ENST00000441698 788 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXN1O15353 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.42■□□□□ 0.54
FOXN1O15353 AC098935.1-201ENST00000446057 611 ntBASIC18.42■□□□□ 0.54
FOXN1O15353 AC093724.1-201ENST00000448659 1027 ntBASIC18.42■□□□□ 0.54
FOXN1O15353 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXN1O15353 NUP210P1-202ENST00000504322 710 ntBASIC18.42■□□□□ 0.54
FOXN1O15353 AC044849.1-201ENST00000519737 1188 ntBASIC18.42■□□□□ 0.54
FOXN1O15353 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.42■□□□□ 0.54
FOXN1O15353 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.42■□□□□ 0.54
FOXN1O15353 RN7SL774P-201ENST00000577467 290 ntBASIC18.42■□□□□ 0.54
FOXN1O15353 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXN1O15353 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXN1O15353 COX6A1P2-201ENST00000620597 330 ntBASIC18.42■□□□□ 0.54
FOXN1O15353 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN1O15353 AC069224.1-201ENST00000566372 1715 ntBASIC18.42■□□□□ 0.54
FOXN1O15353 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN1O15353 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN1O15353 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXN1O15353 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN1O15353 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN1O15353 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXN1O15353 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXN1O15353 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN1O15353 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN1O15353 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN1O15353 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXN1O15353 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXN1O15353 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXN1O15353 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms