Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TO15178 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TO15178 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TO15178 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.28□□□□□ -0.12
TO15178 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TO15178 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TO15178 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TO15178 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TO15178 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TO15178 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TO15178 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.27□□□□□ -0.12
TO15178 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TO15178 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TO15178 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.27□□□□□ -0.12
TO15178 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TO15178 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TO15178 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TO15178 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TO15178 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TO15178 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TO15178 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TO15178 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.27□□□□□ -0.12
TO15178 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TO15178 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.27□□□□□ -0.12
TO15178 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TO15178 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TO15178 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TO15178 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TO15178 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TO15178 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
TO15178 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.27□□□□□ -0.13
TO15178 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.13
TO15178 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TO15178 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.27□□□□□ -0.13
TO15178 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.27□□□□□ -0.13
TO15178 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TO15178 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.27□□□□□ -0.13
TO15178 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TO15178 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.27□□□□□ -0.13
TO15178 AC120045.2-201ENST00000567334 178 ntBASIC14.27□□□□□ -0.13
TO15178 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.27□□□□□ -0.13
TO15178 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.27□□□□□ -0.13
TO15178 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.27□□□□□ -0.13
TO15178 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TO15178 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.27□□□□□ -0.13
TO15178 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TO15178 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TO15178 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.27□□□□□ -0.13
TO15178 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
TO15178 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TO15178 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
TO15178 AC104581.4-201ENST00000623126 3052 ntBASIC14.27□□□□□ -0.13
TO15178 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.27□□□□□ -0.13
TO15178 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TO15178 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TO15178 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TO15178 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TO15178 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.27□□□□□ -0.13
TO15178 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
TO15178 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TO15178 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TO15178 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TO15178 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
TO15178 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.26□□□□□ -0.13
TO15178 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.26□□□□□ -0.13
TO15178 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TO15178 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 AC092384.3-202ENST00000564646 2873 ntBASIC14.26□□□□□ -0.13
TO15178 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.26□□□□□ -0.13
TO15178 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TO15178 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.26□□□□□ -0.13
TO15178 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TO15178 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TO15178 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TO15178 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.26□□□□□ -0.13
TO15178 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.26□□□□□ -0.13
TO15178 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.26□□□□□ -0.13
TO15178 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 533 ms