Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SOX1O00570 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.19■□□□□ 0.18
SOX1O00570 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.19■□□□□ 0.18
SOX1O00570 AP001184.1-201ENST00000637936 376 ntBASIC16.19■□□□□ 0.18
SOX1O00570 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SOX1O00570 ZNF436-AS1-201ENST00000335648 2547 ntBASIC16.19■□□□□ 0.18
SOX1O00570 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.19■□□□□ 0.18
SOX1O00570 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SOX1O00570 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX1O00570 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX1O00570 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.19■□□□□ 0.18
SOX1O00570 SHC1P1-201ENST00000425230 1745 ntBASIC16.19■□□□□ 0.18
SOX1O00570 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX1O00570 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SOX1O00570 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC16.19■□□□□ 0.18
SOX1O00570 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.19■□□□□ 0.18
SOX1O00570 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SOX1O00570 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX1O00570 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.18■□□□□ 0.18
SOX1O00570 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.18■□□□□ 0.18
SOX1O00570 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SOX1O00570 CROCCP1-201ENST00000426910 5675 ntBASIC16.18■□□□□ 0.18
SOX1O00570 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX1O00570 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SOX1O00570 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.18■□□□□ 0.18
SOX1O00570 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX1O00570 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX1O00570 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.18■□□□□ 0.18
SOX1O00570 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX1O00570 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX1O00570 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX1O00570 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX1O00570 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX1O00570 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC16.18■□□□□ 0.18
SOX1O00570 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.18■□□□□ 0.18
SOX1O00570 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SOX1O00570 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.18■□□□□ 0.18
SOX1O00570 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC16.18■□□□□ 0.18
SOX1O00570 AP000911.2-201ENST00000534330 502 ntBASIC16.18■□□□□ 0.18
SOX1O00570 AC093752.3-201ENST00000567343 901 ntBASIC16.18■□□□□ 0.18
SOX1O00570 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.18■□□□□ 0.18
SOX1O00570 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.18■□□□□ 0.18
SOX1O00570 AL157813.1-201ENST00000612996 587 ntBASIC16.18■□□□□ 0.18
SOX1O00570 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.18■□□□□ 0.18
SOX1O00570 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC16.18■□□□□ 0.18
SOX1O00570 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
SOX1O00570 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX1O00570 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SOX1O00570 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX1O00570 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.18■□□□□ 0.18
SOX1O00570 AC015909.3-201ENST00000572855 1794 ntBASIC16.18■□□□□ 0.18
SOX1O00570 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SOX1O00570 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SOX1O00570 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SOX1O00570 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 AC136759.1-202ENST00000530858 2194 ntBASIC16.17■□□□□ 0.18
SOX1O00570 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SOX1O00570 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.17■□□□□ 0.18
SOX1O00570 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.17■□□□□ 0.18
SOX1O00570 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SOX1O00570 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SOX1O00570 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.17■□□□□ 0.18
SOX1O00570 AL807761.2-201ENST00000422849 729 ntBASIC16.17■□□□□ 0.18
SOX1O00570 AC078875.1-201ENST00000431907 724 ntBASIC16.17■□□□□ 0.18
SOX1O00570 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC16.17■□□□□ 0.18
SOX1O00570 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC16.17■□□□□ 0.18
SOX1O00570 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 MESTP3-201ENST00000503460 968 ntBASIC16.17■□□□□ 0.18
SOX1O00570 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
SOX1O00570 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.17■□□□□ 0.18
SOX1O00570 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.17■□□□□ 0.18
SOX1O00570 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC16.17■□□□□ 0.18
SOX1O00570 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.17■□□□□ 0.18
SOX1O00570 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.17■□□□□ 0.18
SOX1O00570 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SOX1O00570 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SOX1O00570 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SOX1O00570 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.17■□□□□ 0.18
SOX1O00570 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOX1O00570 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.17■□□□□ 0.18
SOX1O00570 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX1O00570 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX1O00570 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms