Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLIC1O00299 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.65□□□□□ -0.06
CLIC1O00299 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.65□□□□□ -0.06
CLIC1O00299 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
CLIC1O00299 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
CLIC1O00299 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CLIC1O00299 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.64□□□□□ -0.07
CLIC1O00299 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.64□□□□□ -0.07
CLIC1O00299 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
CLIC1O00299 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.64□□□□□ -0.07
CLIC1O00299 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.64□□□□□ -0.07
CLIC1O00299 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.64□□□□□ -0.07
CLIC1O00299 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.64□□□□□ -0.07
CLIC1O00299 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.64□□□□□ -0.07
CLIC1O00299 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.64□□□□□ -0.07
CLIC1O00299 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CLIC1O00299 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.64□□□□□ -0.07
CLIC1O00299 AC093520.2-201ENST00000561830 333 ntBASIC14.64□□□□□ -0.07
CLIC1O00299 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 AP000845.1-201ENST00000581677 2131 ntBASIC14.64□□□□□ -0.07
CLIC1O00299 AC011467.4-201ENST00000594891 528 ntBASIC14.64□□□□□ -0.07
CLIC1O00299 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
CLIC1O00299 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CLIC1O00299 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.64□□□□□ -0.07
CLIC1O00299 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.64□□□□□ -0.07
CLIC1O00299 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.64□□□□□ -0.07
CLIC1O00299 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.64□□□□□ -0.07
CLIC1O00299 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.64□□□□□ -0.07
CLIC1O00299 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
CLIC1O00299 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.64□□□□□ -0.07
CLIC1O00299 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CLIC1O00299 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CLIC1O00299 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CLIC1O00299 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.64□□□□□ -0.07
CLIC1O00299 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CLIC1O00299 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CLIC1O00299 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.64□□□□□ -0.07
CLIC1O00299 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.64□□□□□ -0.07
CLIC1O00299 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CLIC1O00299 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CLIC1O00299 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.63□□□□□ -0.07
CLIC1O00299 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.63□□□□□ -0.07
CLIC1O00299 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.63□□□□□ -0.07
CLIC1O00299 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
CLIC1O00299 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.63□□□□□ -0.07
CLIC1O00299 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.63□□□□□ -0.07
CLIC1O00299 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 GPS2P2-201ENST00000430745 888 ntBASIC14.63□□□□□ -0.07
CLIC1O00299 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.63□□□□□ -0.07
CLIC1O00299 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.63□□□□□ -0.07
CLIC1O00299 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLIC1O00299 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.63□□□□□ -0.07
CLIC1O00299 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.63□□□□□ -0.07
CLIC1O00299 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.63□□□□□ -0.07
CLIC1O00299 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.63□□□□□ -0.07
CLIC1O00299 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.63□□□□□ -0.07
CLIC1O00299 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.63□□□□□ -0.07
CLIC1O00299 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.63□□□□□ -0.07
CLIC1O00299 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.63□□□□□ -0.07
CLIC1O00299 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms