Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RNF103-CHMP3A0A140T963 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 MROH4P-201ENST00000431302 1578 ntBASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 FGD5P1-202ENST00000614866 2498 ntBASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 RPS8P6-201ENST00000426177 609 ntBASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 POLD2P1-201ENST00000511220 997 ntBASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 KRT18P58-201ENST00000527480 1120 ntBASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.03■□□□□ -0
RNF103-CHMP3A0A140T963 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 REXO1L1P-202ENST00000608646 1974 ntBASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.02■□□□□ -0
RNF103-CHMP3A0A140T963 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RNF103-CHMP3A0A140T963 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNF103-CHMP3A0A140T963 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RNF103-CHMP3A0A140T963 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNF103-CHMP3A0A140T963 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNF103-CHMP3A0A140T963 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.02□□□□□ -0.01
RNF103-CHMP3A0A140T963 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.02□□□□□ -0.01
RNF103-CHMP3A0A140T963 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNF103-CHMP3A0A140T963 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNF103-CHMP3A0A140T963 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.02□□□□□ -0.01
RNF103-CHMP3A0A140T963 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.02□□□□□ -0.01
RNF103-CHMP3A0A140T963 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RNF103-CHMP3A0A140T963 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.01□□□□□ -0.01
RNF103-CHMP3A0A140T963 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF103-CHMP3A0A140T963 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF103-CHMP3A0A140T963 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RNF103-CHMP3A0A140T963 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RNF103-CHMP3A0A140T963 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
RNF103-CHMP3A0A140T963 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
RNF103-CHMP3A0A140T963 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF103-CHMP3A0A140T963 AL136982.4-201ENST00000437689 1740 ntBASIC15.01□□□□□ -0.01
RNF103-CHMP3A0A140T963 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF103-CHMP3A0A140T963 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF103-CHMP3A0A140T963 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.01□□□□□ -0.01
RNF103-CHMP3A0A140T963 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF103-CHMP3A0A140T963 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF103-CHMP3A0A140T963 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RNF103-CHMP3A0A140T963 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.01□□□□□ -0.01
RNF103-CHMP3A0A140T963 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms