Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 DGCR5-201ENST00000399539 862 ntBASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 AC104596.2-201ENST00000512793 793 ntBASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 AC026410.3-201ENST00000514280 936 ntBASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 AC092552.1-201ENST00000547243 906 ntBASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 INTS4P2-202ENST00000614726 2019 ntBASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DTX4Q9Y2E6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 AL359711.2-201ENST00000563105 872 ntBASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DTX4Q9Y2E6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
DTX4Q9Y2E6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
DTX4Q9Y2E6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
DTX4Q9Y2E6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
DTX4Q9Y2E6 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.33□□□□□ -0.11
DTX4Q9Y2E6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.33□□□□□ -0.11
DTX4Q9Y2E6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
DTX4Q9Y2E6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.33□□□□□ -0.11
DTX4Q9Y2E6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
DTX4Q9Y2E6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
DTX4Q9Y2E6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
DTX4Q9Y2E6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DTX4Q9Y2E6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DTX4Q9Y2E6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
DTX4Q9Y2E6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DTX4Q9Y2E6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DTX4Q9Y2E6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
DTX4Q9Y2E6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DTX4Q9Y2E6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms