Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 MSTO2P-201ENST00000314835 1709 ntBASIC15.81■□□□□ 0.12
EBF1Q9UH73 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.81■□□□□ 0.12
EBF1Q9UH73 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
EBF1Q9UH73 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
EBF1Q9UH73 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.81■□□□□ 0.12
EBF1Q9UH73 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.81■□□□□ 0.12
EBF1Q9UH73 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.81■□□□□ 0.12
EBF1Q9UH73 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.81■□□□□ 0.12
EBF1Q9UH73 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
EBF1Q9UH73 AC022137.2-201ENST00000503482 481 ntBASIC15.81■□□□□ 0.12
EBF1Q9UH73 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.81■□□□□ 0.12
EBF1Q9UH73 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.81■□□□□ 0.12
EBF1Q9UH73 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.81■□□□□ 0.12
EBF1Q9UH73 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.81■□□□□ 0.12
EBF1Q9UH73 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.81■□□□□ 0.12
EBF1Q9UH73 RN7SL560P-201ENST00000577943 264 ntBASIC15.81■□□□□ 0.12
EBF1Q9UH73 MIR3615-201ENST00000581999 87 ntBASIC15.81■□□□□ 0.12
EBF1Q9UH73 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.81■□□□□ 0.12
EBF1Q9UH73 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.81■□□□□ 0.12
EBF1Q9UH73 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.81■□□□□ 0.12
EBF1Q9UH73 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.81■□□□□ 0.12
EBF1Q9UH73 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.81■□□□□ 0.12
EBF1Q9UH73 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EBF1Q9UH73 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.81■□□□□ 0.12
EBF1Q9UH73 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 CNN2P8-201ENST00000421872 913 ntBASIC15.8■□□□□ 0.12
EBF1Q9UH73 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 C2orf27AP3-201ENST00000434123 579 ntBASIC15.8■□□□□ 0.12
EBF1Q9UH73 RPL13AP20-201ENST00000459725 609 ntBASIC15.8■□□□□ 0.12
EBF1Q9UH73 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 AC106760.1-201ENST00000508690 800 ntBASIC15.8■□□□□ 0.12
EBF1Q9UH73 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 AC244669.2-201ENST00000612320 853 ntBASIC15.8■□□□□ 0.12
EBF1Q9UH73 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 AL354718.3-201ENST00000616414 581 ntBASIC15.8■□□□□ 0.12
EBF1Q9UH73 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 CR382287.1-201ENST00000623954 586 ntBASIC15.8■□□□□ 0.12
EBF1Q9UH73 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.8■□□□□ 0.12
EBF1Q9UH73 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EBF1Q9UH73 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.79■□□□□ 0.12
EBF1Q9UH73 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms