Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 AC022217.1-201ENST00000521069 738 ntBASIC15.33■□□□□ 0.04
NCDNQ9UBB6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.33■□□□□ 0.04
NCDNQ9UBB6 RN7SL48P-201ENST00000579283 293 ntBASIC15.33■□□□□ 0.04
NCDNQ9UBB6 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.33■□□□□ 0.04
NCDNQ9UBB6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCDNQ9UBB6 AC046158.3-201ENST00000624947 2558 ntBASIC15.33■□□□□ 0.04
NCDNQ9UBB6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCDNQ9UBB6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCDNQ9UBB6 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NCDNQ9UBB6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NCDNQ9UBB6 AC092171.3-201ENST00000610122 2651 ntBASIC15.33■□□□□ 0.04
NCDNQ9UBB6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCDNQ9UBB6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
NCDNQ9UBB6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
NCDNQ9UBB6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCDNQ9UBB6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.33■□□□□ 0.04
NCDNQ9UBB6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCDNQ9UBB6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
NCDNQ9UBB6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCDNQ9UBB6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCDNQ9UBB6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCDNQ9UBB6 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
NCDNQ9UBB6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCDNQ9UBB6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 NOC2LP1-201ENST00000450578 752 ntBASIC15.32■□□□□ 0.04
NCDNQ9UBB6 AC021723.1-201ENST00000486306 515 ntBASIC15.32■□□□□ 0.04
NCDNQ9UBB6 AC106794.1-201ENST00000506935 792 ntBASIC15.32■□□□□ 0.04
NCDNQ9UBB6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.32■□□□□ 0.04
NCDNQ9UBB6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NCDNQ9UBB6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 PKD1P5-201ENST00000532415 10291 ntBASIC15.31■□□□□ 0.04
NCDNQ9UBB6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 AC234644.1-201ENST00000406065 370 ntBASIC15.31■□□□□ 0.04
NCDNQ9UBB6 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 AC098935.1-201ENST00000446057 611 ntBASIC15.31■□□□□ 0.04
NCDNQ9UBB6 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 AL161670.2-201ENST00000557650 1227 ntBASIC15.31■□□□□ 0.04
NCDNQ9UBB6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 AL450472.2-201ENST00000603663 1156 ntBASIC15.31■□□□□ 0.04
NCDNQ9UBB6 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCDNQ9UBB6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms