Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAD9AQ99638 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RAD9AQ99638 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.37■□□□□ 0.21
RAD9AQ99638 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAD9AQ99638 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.37■□□□□ 0.21
RAD9AQ99638 AC069218.1-201ENST00000435269 762 ntBASIC16.37■□□□□ 0.21
RAD9AQ99638 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.37■□□□□ 0.21
RAD9AQ99638 MARK2P5-201ENST00000507649 634 ntBASIC16.37■□□□□ 0.21
RAD9AQ99638 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAD9AQ99638 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.37■□□□□ 0.21
RAD9AQ99638 AC018635.2-201ENST00000608625 364 ntBASIC16.37■□□□□ 0.21
RAD9AQ99638 AF254983.2-201ENST00000612331 135 ntBASIC16.37■□□□□ 0.21
RAD9AQ99638 AP000346.4-201ENST00000614827 381 ntBASIC16.37■□□□□ 0.21
RAD9AQ99638 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAD9AQ99638 AL645728.2-202ENST00000641679 227 ntBASIC16.37■□□□□ 0.21
RAD9AQ99638 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAD9AQ99638 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAD9AQ99638 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAD9AQ99638 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.37■□□□□ 0.21
RAD9AQ99638 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAD9AQ99638 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RAD9AQ99638 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RAD9AQ99638 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAD9AQ99638 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RAD9AQ99638 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RAD9AQ99638 FLJ38576-201ENST00000623820 2459 ntBASIC16.37■□□□□ 0.21
RAD9AQ99638 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAD9AQ99638 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.37■□□□□ 0.21
RAD9AQ99638 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAD9AQ99638 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAD9AQ99638 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAD9AQ99638 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RAD9AQ99638 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.36■□□□□ 0.21
RAD9AQ99638 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RAD9AQ99638 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.36■□□□□ 0.21
RAD9AQ99638 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
RAD9AQ99638 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.36■□□□□ 0.21
RAD9AQ99638 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.36■□□□□ 0.21
RAD9AQ99638 MESTP3-201ENST00000503460 968 ntBASIC16.36■□□□□ 0.21
RAD9AQ99638 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.36■□□□□ 0.21
RAD9AQ99638 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.36■□□□□ 0.21
RAD9AQ99638 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.36■□□□□ 0.21
RAD9AQ99638 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.36■□□□□ 0.21
RAD9AQ99638 SAMD11P1-201ENST00000571429 661 ntBASIC16.36■□□□□ 0.21
RAD9AQ99638 MIR3147-201ENST00000577811 66 ntBASIC16.36■□□□□ 0.21
RAD9AQ99638 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.36■□□□□ 0.21
RAD9AQ99638 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.36■□□□□ 0.21
RAD9AQ99638 AL353770.1-201ENST00000614915 403 ntBASIC16.36■□□□□ 0.21
RAD9AQ99638 AL136295.7-201ENST00000619226 1200 ntBASIC16.36■□□□□ 0.21
RAD9AQ99638 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.36■□□□□ 0.21
RAD9AQ99638 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.36■□□□□ 0.21
RAD9AQ99638 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.36■□□□□ 0.21
RAD9AQ99638 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RAD9AQ99638 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 CLUHP2-201ENST00000426660 1303 ntBASIC16.36■□□□□ 0.21
RAD9AQ99638 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RAD9AQ99638 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.36■□□□□ 0.21
RAD9AQ99638 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.36■□□□□ 0.21
RAD9AQ99638 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.36■□□□□ 0.21
RAD9AQ99638 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.36■□□□□ 0.21
RAD9AQ99638 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RAD9AQ99638 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAD9AQ99638 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.35■□□□□ 0.21
RAD9AQ99638 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.35■□□□□ 0.21
RAD9AQ99638 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
RAD9AQ99638 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.35■□□□□ 0.21
RAD9AQ99638 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RAD9AQ99638 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 AL157791.1-201ENST00000553667 1699 ntBASIC16.35■□□□□ 0.21
RAD9AQ99638 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms