Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 COX11P1-201ENST00000489116 835 ntBASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 SLC25A6P2-201ENST00000497974 877 ntBASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 AP002469.2-201ENST00000531724 424 ntBASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 AL139424.1-201ENST00000607572 797 ntBASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 BNIP3P1-202ENST00000550043 1585 ntBASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 Z82170.1-201ENST00000625081 3192 ntBASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CHCHD1Q96BP2 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 AC243562.2-201ENST00000561247 970 ntBASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 AC097493.4-201ENST00000641197 219 ntBASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms