Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTN4IP1Q8WWV3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 REXO1L1P-202ENST00000608646 1974 ntBASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 AC211486.1-202ENST00000416371 468 ntBASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 AC005237.2-201ENST00000434368 219 ntBASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 AC211476.1-201ENST00000503899 468 ntBASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 SLC25A39P2-201ENST00000537614 270 ntBASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 AJ011931.1-201ENST00000618749 2492 ntBASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTN4IP1Q8WWV3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 AC005912.2-201ENST00000619492 2400 ntBASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 KRT18P13-201ENST00000400056 1290 ntBASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 AC004461.1-201ENST00000412461 403 ntBASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 KRT18P32-201ENST00000424695 1287 ntBASIC13.12□□□□□ -0.31
RTN4IP1Q8WWV3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms