Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 CICP24-201ENST00000605464 2705 ntBASIC16■□□□□ 0.15
PCDH19Q8TAB3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 CLK3P2-201ENST00000427566 1453 ntBASIC16■□□□□ 0.15
PCDH19Q8TAB3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDH19Q8TAB3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16■□□□□ 0.15
PCDH19Q8TAB3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16■□□□□ 0.15
PCDH19Q8TAB3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16■□□□□ 0.15
PCDH19Q8TAB3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16■□□□□ 0.15
PCDH19Q8TAB3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16■□□□□ 0.15
PCDH19Q8TAB3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16■□□□□ 0.15
PCDH19Q8TAB3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16■□□□□ 0.15
PCDH19Q8TAB3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16■□□□□ 0.15
PCDH19Q8TAB3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
PCDH19Q8TAB3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH19Q8TAB3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 AC104457.1-201ENST00000401024 814 ntBASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 AC104794.3-201ENST00000566840 1248 ntBASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 AL645728.2-202ENST00000641679 227 ntBASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 WASH3P-207ENST00000560956 1394 ntBASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
PCDH19Q8TAB3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.98■□□□□ 0.15
PCDH19Q8TAB3 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms