Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.68□□□□□ -0.06
SIMC1Q8NDZ2 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 C18orf15-201ENST00000623680 2534 ntBASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 AC023157.3-201ENST00000619086 2088 ntBASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 AC091951.1-201ENST00000512854 2465 ntBASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIMC1Q8NDZ2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 AC022144.1-201ENST00000602255 1580 ntBASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 SDHAP3-202ENST00000515467 728 ntBASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SIMC1Q8NDZ2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms